RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 BBS1Q8NFJ9 593 aa0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 PYCR2Q96C36 320 aa0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 SNRNP40Q96DI7 357 aaKnown RBP0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 PIWIL1Q96J94 861 aaKnown RBP0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 FEVQ99581 238 aa0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 CPNE1Q99829 537 aa0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 RIOK1Q9BRS2 568 aaKnown RBP0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 NXF3Q9H4D5 531 aaKnown RBP0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 DNAJC4Q9NNZ3 241 aa0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 PDP2Q9P2J9 529 aa0.26□□□□□ -2.37
RNU4-11P-201ENST00000365287 NLRC5Q86WI3 1866 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 TDRD9Q8NDG6 1382 aaKnown RBP0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 OR5H15A6NDH6 313 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 NEDD8-MDP1E9PL57 170 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 J3QKU1 62 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 NBR2O15453 112 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 PENKP01210 267 aaPredicted RBP0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 OR3A3P47888 321 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ARHGDIAP52565 204 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 UBASH3AP57075 661 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 IRF3Q14653 427 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 MAPK11Q15759 364 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 SNAPC1Q16533 368 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 PTGISQ16647 500 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ODF2Q5BJF6 829 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 IGSF11Q5DX21 431 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ANKRD33Q7Z3H0 272 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ZNF709Q8N972 641 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ANKRD42Q8N9B4 389 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 CAMKVQ8NCB2 501 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 OR2L8Q8NGY9 312 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 C8orf46Q8TAG6 207 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 TFB1MQ8WVM0 346 aaKnown RBP0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 CRYGNQ8WXF5 182 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 USP6NLQ92738 828 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 C7orf26Q96N11 449 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ITPAQ9BY32 194 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 NMNAT2Q9BZQ4 307 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 FTOQ9C0B1 505 aaKnown RBP eCLIP0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 DPEP3Q9H4B8 488 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ELL3Q9HB65 397 aaPredicted RBP0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 PHPT1Q9NRX4 125 aaPredicted RBP0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 MRGBPQ9NV56 204 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 SLC24A2Q9UI40 661 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 CRYL1Q9Y2S2 319 aa0.25□□□□□ -2.37
RNU4-11P-201ENST00000365287 ACEP12821 1306 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 FAM166BA8MTA8 275 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 TRIM77I1YAP6 450 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 CTDSP2O14595 271 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 MLNRO43193 412 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 PYGLP06737 847 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 CCDC166P0CW27 439 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 MYL6BP14649 208 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SRSF5Q13243 272 aaKnown RBP0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 GIT2Q14161 759 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 BECN1Q14457 450 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 PPA1Q15181 289 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SBK1Q52WX2 424 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 C5orf47Q569G3 176 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 RAB41Q5JT25 222 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SUSD4Q5VX71 490 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 PIGWQ7Z7B1 504 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 FBXW8Q8N3Y1 598 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 MDS2Q8NDY4 140 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 CFAP61Q8NHU2 1237 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 CCDC26Q8TAB7 109 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SLC22A8Q8TCC7 542 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 CD99L2Q8TCZ2 262 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SLC25A38Q96DW6 304 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SCLT1Q96NL6 688 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 MUS81Q96NY9 551 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 KLF6Q99612 283 aaPredicted RBP0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SMARCAD1Q9H4L7 1026 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 ANKZF1Q9H8Y5 726 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 RPF1Q9H9Y2 349 aaKnown RBP0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 RAI14Q9P0K7 980 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 ARMCX3Q9UH62 379 aaPredicted RBP0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 DDX25Q9UHL0 483 aaKnown RBP0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SCML2Q9UQR0 700 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 SAMHD1Q9Y3Z3 626 aaKnown RBP0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 CLCA3PQ9Y6N3 262 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 GPR179Q6PRD1 2367 aa0.24□□□□□ -2.37
RNU4-11P-201ENST00000365287 CHD4Q14839 1912 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 PARD3Q8TEW0 1356 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 A0A1W2PPM1 405 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 E5RGE8 158 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 TMX2-CTNND1H3BSU7 103 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 CLDN4O14493 209 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 ABCD4O14678 606 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 ADAMDEC1O15204 470 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 PSMD3O43242 534 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 FHP07954 510 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 EPORP19235 508 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 HSD17B3P37058 310 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 MNAT1P51948 309 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 MFAP2P55001 183 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 POLR2LP62875 67 aaKnown RBP0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 SLAQ13239 276 aa0.23□□□□□ -2.37
RNU4-11P-201ENST00000365287 BIRC3Q13489 604 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms