RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 MAP2K3P46734 347 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 CDH11P55287 796 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 TBCEQ15813 527 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 C8orf82Q6P1X6 216 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 RSPO2Q6UXX9 243 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 NEIL2Q969S2 332 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 SLC35G5Q96KT7 338 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 NELL2Q99435 816 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 SLIRPQ9GZT3 109 aaKnown RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 ZFR2Q9UPR6 939 aaKnown RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 TMEM98Q9Y2Y6 226 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 H7BY64 318 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 SELPP16109 830 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 TGM1P22735 817 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 TBPL1P62380 186 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 ACVR1Q04771 509 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 ZNF630Q2M218 657 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 PLAG1Q6DJT9 500 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 MACC1Q6ZN28 852 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 OR51G2Q8NGK0 314 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 PRAP1Q96NZ9 151 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 FERD3LQ96RJ6 166 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 ITM2BQ9Y287 266 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 LOC102723532A0A0G2JNH3 316 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 NCBP2P52298 156 aaKnown RBP eCLIP13.06□□□□□ -0.322e-10■■■■□ 21.3
SGMS1-202ENST00000361781 HOXC5Q00444 222 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 TMEM115Q12893 351 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 PAQR6Q6TCH4 344 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ZNF740Q8NDX6 193 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 DENND6BQ8NEG7 585 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 OR52L1Q8NGH7 329 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 TADA1Q96BN2 335 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 TMEM19Q96HH6 336 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 AIF1LQ9BQI0 150 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 SLC12A9Q9BXP2 914 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 PRELID1Q9Y255 219 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ANKRD34BA5PLL1 514 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ARHGEF33A8MVX0 844 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 GASTP01350 101 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 HOXD8P13378 290 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-202ENST00000361781 CHMP24386 653 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 PDHA2P29803 388 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 MAN2A2P49641 1150 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 SLAMF1Q13291 335 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 TBC1D19Q8N5T2 526 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ZNF461Q8TAF7 563 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 SLC35B4Q969S0 331 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 TRIB3Q96RU7 358 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ENPP4Q9Y6X5 453 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 FEZF1A0PJY2 475 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 TBC1D3BA6NDS4 549 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 FAM170BA6NMN3 283 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ANHXE9PGG2 379 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 MRPL3P09001 348 aaKnown RBP13.06□□□□□ -0.32
SGMS1-202ENST00000361781 CBSLP0DN79 551 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 UQCRC1P31930 480 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 CBSP35520 551 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 CSNK1DP48730 415 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 KCNC4Q03721 635 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 SREBF2Q12772 1141 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 CBLBQ13191 982 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 GAB1Q13480 694 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 RNF44Q7L0R7 432 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 PEX5LQ8IYB4 626 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 ADAMTS15Q8TE58 950 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 JPH3Q8WXH2 748 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-202ENST00000361781 SIPA1Q96FS4 1042 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 MAGEB10Q96LZ2 347 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-202ENST00000361781 SYT17Q9BSW7 474 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 EXTL2Q9UBQ6 330 aa13.06□□□□□ -0.32
SGMS1-202ENST00000361781 COL11A1P12107 1806 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-202ENST00000361781 LEFTY1O75610 366 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 POP7O75817 140 aaKnown RBP13.05□□□□□ -0.32
SGMS1-202ENST00000361781 NCR1O76036 304 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 KCNK2O95069 426 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 SLC35G4P0C7Q5 338 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 PRR35P0CG20 571 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 APEX1P27695 318 aaKnown RBP13.05□□□□□ -0.32
SGMS1-202ENST00000361781 RPS19P39019 145 aaKnown RBP13.05□□□□□ -0.32
SGMS1-202ENST00000361781 AFMIDQ63HM1 303 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 FKBP10Q96AY3 582 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 HRASLS5Q96KN8 279 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 QRFPRQ96P65 431 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 MACROD1Q9BQ69 325 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 C17orf62Q9BQA9 187 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 CDADC1Q9BWV3 514 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 TMEM138Q9NPI0 162 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 MRPL15Q9P015 296 aaKnown RBP13.05□□□□□ -0.32
SGMS1-202ENST00000361781 NDUFAF4Q9P032 175 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 NDRG4Q9ULP0 352 aaKnown RBP13.05□□□□□ -0.32
SGMS1-202ENST00000361781 CCDC88CQ9P219 2028 aa13.05□□□□□ -0.32
SGMS1-202ENST00000361781 IGLV3-10A0A075B6K4 115 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms