RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ORAI3Q9BRQ5 295 aa17.8■□□□□ 0.44
CLIP2-202ENST00000361545 STOX2Q9P2F5 926 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-202ENST00000361545 DPPA5A6NC42 116 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 TMEM35AQ53FP2 167 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 TCEANCQ8N8B7 351 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 FANK1Q8TC84 345 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 TRMT2BQ96GJ1 504 aaKnown RBP17.79■□□□□ 0.44
CLIP2-202ENST00000361545 C1orf21Q9H246 121 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 CSN2P05814 226 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 KLHDC9Q8NEP7 349 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 ANKRA2Q9H9E1 313 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 DRGXA6NNA5 263 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 CLRN1P58418 232 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 CSTF1Q05048 431 aaKnown RBP17.79■□□□□ 0.44
CLIP2-202ENST00000361545 ERMP1Q7Z2K6 904 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 ISCA2Q86U28 154 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 HHIPL1Q96JK4 782 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 ANKMY1Q9P2S6 941 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 BCAS2O75934 225 aaPredicted RBP17.79■□□□□ 0.44
CLIP2-202ENST00000361545 MYOGP15173 224 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 RAET1LQ5VY80 246 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 ANKFN1Q8N957 763 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 SEC14L1Q92503 715 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 HSPA12BQ96MM6 686 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 MEAF6Q9HAF1 191 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 CSNK1G1Q9HCP0 422 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 TMEM184CQ9NVA4 438 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 TMEM5Q9Y2B1 443 aa17.79■□□□□ 0.44
CLIP2-202ENST00000361545 C2orf92A0A1B0GVN3 265 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 SLC35F4A4IF30 521 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 CSTBP04080 98 aaKnown RBP17.78■□□□□ 0.44
CLIP2-202ENST00000361545 CDH15P55291 814 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 LYSMD4Q5XG99 296 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 NLGN4XQ8N0W4 816 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 OR51A7Q8NH64 312 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 C1orf216Q8TAB5 229 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 UHRF1Q96T88 793 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-202ENST00000361545 ZNF576Q9H609 170 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 C5AR2Q9P296 337 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 AK4P27144 223 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-202ENST00000361545 RORCP51449 518 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 ARFGAP1Q8N6T3 406 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 SMIM14Q96QK8 99 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 SLC12A9Q9BXP2 914 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 CITO14578 2027 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 KCNJ13O60928 360 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 HK1P19367 917 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 ELOAQ14241 798 aaKnown RBP17.78■□□□□ 0.44
CLIP2-202ENST00000361545 EGFLAMQ63HQ2 1017 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 USP43Q70EL4 1123 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 ARMC10Q8N2F6 343 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 KCTD7Q96MP8 289 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 ZFYVE21Q9BQ24 234 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 CXCL16Q9H2A7 254 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 AIG1Q9NVV5 245 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 NPIPA2E9PIF3 369 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 NPIPA3F8WFD2 350 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 HLA-FP30511 346 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 GJA4P35212 333 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 SH3BP2P78314 561 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 KCNK12Q9HB15 430 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 TRIM36Q9NQ86 728 aa17.78■□□□□ 0.44
CLIP2-202ENST00000361545 KIAA0100Q14667 2235 aaKnown RBP17.78■□□□□ 0.44
CLIP2-202ENST00000361545 CBFA2T3O75081 653 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 ITGA5P08648 1049 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 CARD17Q5XLA6 110 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 KDELC1Q6UW63 502 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 ACVR1CQ8NER5 493 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 C9orf43Q8TAL5 461 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-202ENST00000361545 CST11Q9H112 138 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 B4GALT7Q9UBV7 327 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 LAMP5Q9UJQ1 280 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 GRIP1Q9Y3R0 1128 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 DNAJC15Q9Y5T4 150 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 GATBO75879 557 aaKnown RBP17.77■□□□□ 0.44
CLIP2-202ENST00000361545 ITGBL1O95965 494 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-202ENST00000361545 DRD2P14416 443 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 VMACQ2NL98 169 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 MPP7Q5T2T1 576 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 RAB43Q86YS6 212 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 TREML1Q86YW5 311 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 PACRGLQ8N7B6 248 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 OR52P1PQ8NH57 321 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 OSTF1Q92882 214 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 TMCO6Q96DC7 493 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 ALS2Q96Q42 1657 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 NWD2Q9ULI1 1742 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 ZNF879B4DU55 563 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 MAOBP27338 520 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 HTR6P50406 440 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 MANEALQ5VSG8 457 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 CWF19L1Q69YN2 538 aaKnown RBP17.77■□□□□ 0.44
CLIP2-202ENST00000361545 LIPIQ6XZB0 460 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 CYS1Q717R9 158 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 DPPA4Q7L190 304 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 OR6N2Q8NGY6 317 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 RTP4Q96DX8 246 aa17.77■□□□□ 0.44
CLIP2-202ENST00000361545 PELOQ9BRX2 385 aaKnown RBP17.77■□□□□ 0.44
CLIP2-202ENST00000361545 MRPL3P09001 348 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms