RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TUBA3CQ13748 450 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 RAB39AQ14964 217 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 LAPTM4AQ15012 233 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 CTU2Q2VPK5 515 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 ABHD17CQ6PCB6 329 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 TMEM92Q6UXU6 159 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 C6orf120Q7Z4R8 191 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 TSEN54Q7Z6J9 526 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 CLVS1Q8IUQ0 354 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 FBXL6Q8N531 539 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 AICDAQ9GZX7 198 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 KLHL31Q9H511 634 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 CXorf21Q9HAI6 301 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 SLC35C2Q9NQQ7 365 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 PRDM7Q9NQW5 492 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 GMPPBQ9Y5P6 360 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 LYVE1Q9Y5Y7 322 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 F5P12259 2224 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 PRAMEF33A0A0G2JMD5 474 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 TCRBV21S2A2A0A5A6 115 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 TMEM247A6NEH6 219 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 A8MVJ9 347 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 SCAMP1O15126 338 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 TRMUO75648 421 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 HIST1H1TP22492 207 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 SLC5A2P31639 672 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 CCT3P49368 545 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 CLK3P49761 638 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 RPS15AP62244 130 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 IL5RAQ01344 420 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 CDK5R2Q13319 367 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 RAPSNQ13702 412 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 KIAA1614Q5VZ46 1190 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 MRM1Q6IN84 353 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 ZNF793Q6ZN11 406 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 RD3Q7Z3Z2 195 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 SLC44A3Q8N4M1 653 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 HORMAD2Q8N7B1 307 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 AMER3Q8N944 861 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 OR4E2Q8NGC2 313 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 TMEM121BQ9BXQ6 578 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 LTB4R2Q9NPC1 389 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 TRNAU1APQ9NX07 287 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 KLF15Q9UIH9 416 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 RAB23Q9ULC3 237 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 SNX5Q9Y5X3 404 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 DGKBQ9Y6T7 804 aa17.36■□□□□ 0.37
PDLIM7-203ENST00000359895 CCDC88CQ9P219 2028 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 A0A0G2JN53 185 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 SLC1A7O00341 560 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 MAN2B1O00754 1011 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ANXA8P13928 327 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 GABRG2P18507 467 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ATP5A1P25705 553 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 AK4P27144 223 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 POLR2IP36954 125 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ACTR1BP42025 376 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ANXA11P50995 505 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 SRP54P61011 504 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 CXCR4P61073 352 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ACTR1AP61163 376 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 SPIBQ01892 262 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 SLAMF1Q13291 335 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 SIM2Q14190 667 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 KIR2DS3Q14952 304 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 TSPYL5Q86VY4 417 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 PAQR7Q86WK9 346 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 FAM20CQ8IXL6 584 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ACOT4Q8N9L9 421 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 TSACCQ96A04 125 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ISOC1Q96CN7 298 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 BBS4Q96RK4 519 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 PITX2Q99697 317 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 GABARAPL3Q9BY60 117 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 SRMSQ9H3Y6 488 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 KCNK12Q9HB15 430 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 EXD2Q9NVH0 621 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 LYARQ9NX58 379 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 TMEM9Q9P0T7 183 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 C5AR2Q9P296 337 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ZNF624Q9P2J8 865 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 NDRG4Q9ULP0 352 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 CA5BQ9Y2D0 317 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 FAM32AQ9Y421 112 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 TESMINQ9Y4I5 508 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ASB4Q9Y574 426 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 ENPP4Q9Y6X5 453 aa17.35■□□□□ 0.37
PDLIM7-203ENST00000359895 C2CD4DB7Z1M9 353 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 H0Y8X5 98 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 ZW10O43264 779 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 B4GAT1O43505 415 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 RASGRP1O95267 797 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 F3P13726 295 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 DCKP27707 260 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 GPC1P35052 558 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 NUP107P57740 925 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 KCNC4Q03721 635 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 NPRL3Q12980 569 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 NEDD8Q15843 81 aa17.34■□□□□ 0.37
PDLIM7-203ENST00000359895 FAM180BQ6P0A1 224 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms