RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 AGMOQ6ZNB7 445 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZFP41Q8N8Y5 198 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DNERQ8NFT8 737 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR56A1Q8NGH5 318 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 NEURL2Q9BR09 285 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SMPD4Q9NXE4 827 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 MATN3O15232 486 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 THP07101 528 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SPAM1P38567 509 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 MFSD14CQ5VZR4 134 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CRTC1Q6UUV9 634 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZMIZ2Q8NF64 920 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 DPF3Q92784 378 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 REEP4Q9H6H4 257 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FAM86C1Q9NVL1 165 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF282Q9UDV7 671 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR2A25A4D2G3 310 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FABP7O15540 132 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ARSBP15848 533 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 HCAR3P49019 387 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNHIT3Q15649 155 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR10K1Q8NGX5 313 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FAM163AQ96GL9 167 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF578Q96N58 590 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FCRL5Q96RD9 977 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 RHCGQ9UBD6 479 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 EMCNQ9ULC0 261 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 GPSM3Q9Y4H4 160 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 TEX13DA0A0J9YY54 714 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 RGS13O14921 159 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 C8GP07360 202 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SERPINA4P29622 427 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CAMLGP49069 296 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CNTN2Q02246 1040 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 HLA-DQA1Q5Y7H0 255 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SLC46A3Q7Z3Q1 461 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 GPRC5AQ8NFJ5 357 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR6M1Q8NGM8 313 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 GNG8Q9UK08 70 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SLIT3O75094 1523 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SERPINF1P36955 418 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 RRAS2P62070 204 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 NKX6-1P78426 367 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OPCMLQ14982 345 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF791Q3KP31 576 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 AKR1C8PQ5T2L2 129 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 C17orf64Q86WR6 236 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF225Q9UK10 706 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 PSMD9O00233 223 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FLRT2O43155 660 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR1I1O60431 355 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SC5DO75845 299 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 UCHL1P09936 223 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 FCGRTP55899 365 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR12D2P58182 307 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF584Q8IVC4 421 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 SYT14Q8NB59 555 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 CLRN3Q8NCR9 226 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 OR6K6Q8NGW6 343 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 COL26A1Q96A83 441 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 ZDHHC12Q96GR4 267 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 RHBGQ9H310 441 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 PDZD7Q9H5P4 517 aa5.85□□□□□ -1.47
VPS13B-203ENST00000358544 USP9XQ93008 2570 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-203ENST00000358544 USP9YO00507 2555 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GSRP00390 522 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 C1QBP02746 253 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 UGT2B10P36537 528 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 STC1P52823 247 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ITPK1Q13572 414 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PRPF38BQ5VTL8 546 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 IRAK1BP1Q5VVH5 260 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GTF3C2Q8WUA4 911 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GPR88Q9GZN0 384 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SH2B3Q9UQQ2 575 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 B4GALT5O43286 388 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ADAP00813 363 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ZP3P21754 424 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CFL1P23528 166 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CDH5P33151 784 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 AQP6Q13520 282 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GSG1LQ6UXU4 331 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GID4Q8IVV7 300 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 OR2L8Q8NGY9 312 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SHKBP1Q8TBC3 707 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 P2RY13Q9BPV8 354 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 THAP7Q9BT49 309 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 FBXW11Q9UKB1 542 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 NENFQ9UMX5 172 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 DIP2AQ14689 1571 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CD8B2A6NJW9 211 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 H3BUI4 141 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 DBIP07108 87 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CD8BP10966 210 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RHCEP18577 417 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PITPNBP48739 271 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM69Q5SWH9 247 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MFSD4AQ8N468 514 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms