RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 RHCEP18577 417 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 EIF2DP41214 584 aaKnown RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 PFN3P60673 137 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 RBBP4Q09028 425 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 GRIN2CQ14957 1233 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 SF3B4Q15427 424 aaKnown RBP eCLIP6.53□□□□□ -1.369e-8■■■□□ 17.1
RTN4-203ENST00000357376 MZT2AQ6P582 158 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 BHLHB9Q6PI77 547 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 FAM92BQ6ZTR7 304 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 AMZ2Q86W34 360 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 UBTD2Q8WUN7 234 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 BTN2A2Q8WVV5 523 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 GATAD2BQ8WXI9 593 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 VMP1Q96GC9 406 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 PPP1R16AQ96I34 528 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 ING3Q9NXR8 418 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 TRIM64CA6NLI5 447 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 CPSF4LA6NMK7 179 aaKnown RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 ARHGEF15O94989 841 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 F11P03951 625 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 RB1P06400 928 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 HSD3B1P14060 373 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 HSD3B2P26439 372 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 CTGFP29279 349 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 PPM1AP35813 382 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 SLC19A1P41440 591 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 RNF144AP50876 292 aaPredicted RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 CRISP3P54108 245 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 CSTF1Q05048 431 aaKnown RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 MRPL58Q14197 206 aaKnown RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 IDNKQ5T6J7 187 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 NRARPQ7Z6K4 114 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 FAM129CQ86XR2 697 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 MARCH9Q86YJ5 346 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 MMAAQ8IVH4 418 aaKnown RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 ZNF557Q8N988 423 aaPredicted RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 L3MBTL4Q8NA19 623 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 FLCNQ8NFG4 579 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 OR8J2Q8NGG1 315 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 ZNF486Q96H40 463 aaPredicted RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 BHLHE41Q9C0J9 482 aaPredicted RBP6.53□□□□□ -1.36
RTN4-203ENST00000357376 INIPQ9NRY2 104 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 TDP1Q9NUW8 608 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 HCFC1R1Q9NWW0 138 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 P2RX2Q9UBL9 471 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 SEC14L4Q9UDX3 406 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 BTNL2Q9UIR0 455 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 SPATA2Q9UM82 520 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 BOLA1Q9Y3E2 137 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 PARP14Q460N5 1801 aa6.53□□□□□ -1.36
RTN4-203ENST00000357376 METTL15A6NJ78 407 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 PRNPP04156 253 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 EPHX1P07099 455 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 BMP7P18075 431 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 CELP19835 753 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 IDSP22304 550 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 CHMP24386 653 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 TNFSF8P32971 234 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 MAPK9P45984 424 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 CLCNKAP51800 687 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 NKX3-2P78367 333 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 SGCGQ13326 291 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 PLAG1Q6DJT9 500 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 FRMPD2BQ6IN97 320 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 METTL2BQ6P1Q9 378 aaKnown RBP6.52□□□□□ -1.36
RTN4-203ENST00000357376 SLC46A3Q7Z3Q1 461 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 C6orf120Q7Z4R8 191 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 NUDT13Q86X67 352 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 PTOV1Q86YD1 416 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 CDK20Q8IZL9 346 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 SIX5Q8N196 739 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 TRAM1L1Q8N609 369 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 C10orf53Q8N6V4 93 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 OR52L1Q8NGH7 329 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 ZNF671Q8TAW3 534 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 ADAMTS15Q8TE58 950 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 ZNF480Q8WV37 535 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 IRF7Q92985 503 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 WACQ9BTA9 647 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 SLC6A16Q9GZN6 736 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 RACGAP1Q9H0H5 632 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 OR51V1Q9H2C8 321 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 XKR8Q9H6D3 395 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 KRCC1Q9NPI7 259 aaPredicted RBP6.52□□□□□ -1.36
RTN4-203ENST00000357376 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.52□□□□□ -1.361e-7■■□□□ 12.1
RTN4-203ENST00000357376 TBC1D14Q9P2M4 693 aa6.52□□□□□ -1.36
RTN4-203ENST00000357376 PRAMEF33A0A0G2JMD5 474 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 FAM170BA6NMN3 283 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 ARHGAP33O14559 1287 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 AREL1O15033 823 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 ERI3O43414 337 aaKnown RBP6.52□□□□□ -1.37
RTN4-203ENST00000357376 FZD6O60353 706 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 PRAMEF10O60809 474 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 GPR37L1O60883 481 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 ETHE1O95571 254 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 GASTP01350 101 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 SRPRAP08240 638 aaKnown RBP6.52□□□□□ -1.37
RTN4-203ENST00000357376 ACP5P13686 325 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 PRG2P13727 222 aa6.52□□□□□ -1.37
RTN4-203ENST00000357376 KELP23276 732 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms