RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 DFNA5O60443 496 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 B4GALT2O60909 372 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 SCGB1D1O95968 90 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 OAS1P00973 400 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 HTR7P34969 479 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ZNF41P51814 821 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 PCLAFQ15004 111 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ATP6AP1Q15904 470 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ENPP7Q6UWV6 458 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 TSPAN33Q86UF1 283 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 GATSQ8NAP1 163 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 HAS2Q92819 552 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 SH3YL1Q96HL8 342 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 SAMD11Q96NU1 681 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ACP5P13686 325 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 FASLGP48023 281 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 PRMT2P55345 433 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 CXCL9Q07325 125 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 PPIGQ13427 754 aaKnown RBP eCLIP10.62□□□□□ -0.717e-7■■□□□ 12.9
GTF3C1-201ENST00000356183 NPY5RQ15761 445 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 OR6N1Q8NGY5 312 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 EPHA6Q9UF33 1036 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 DLX3O60479 287 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ERCC1P07992 297 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 STSP08842 583 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 LILRB2Q8N423 598 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 PAQR8Q8TEZ7 354 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.712e-9■■■■■ 56.6
GTF3C1-201ENST00000356183 PLD4Q96BZ4 506 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 VRK1Q99986 396 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ACTR6Q9GZN1 396 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 XPNPEP1Q9NQW7 623 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 SERTAD4Q9NUC0 356 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 NLKQ9UBE8 527 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 SLC38A8A6NNN8 435 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 TNFRSF10BO14763 440 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 BCAS1O75363 584 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ALDOBP05062 364 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 GJA5P36382 358 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 CHRNA6Q15825 494 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ITPRIPL2Q3MIP1 535 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 SPANXN4Q5MJ08 99 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 MBLAC2Q68D91 279 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 KIAA0930Q6ICG6 404 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 TATDN1Q6P1N9 297 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 PNCKQ6P2M8 343 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 MRPL41Q8IXM3 137 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 DMAC2Q9NW81 257 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 UBE2J1Q9Y385 318 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 TNS2Q63HR2 1409 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 A0A1W2PP18 115 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 UNC119BA6NIH7 251 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 SERPINA7P05543 415 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 MMP3P08254 477 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 CHRNB1P11230 501 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 CASRP41180 1078 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 RAB5CP51148 216 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 APOBEC3HQ6NTF7 200 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 CHPT1Q8WUD6 406 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ZUFSPQ96AP4 578 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 HYLS1Q96M11 299 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 CCM2Q9BSQ5 444 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 HDHD5Q9BXW7 423 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 KATNBL1Q9H079 304 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ACSL6Q9UKU0 697 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 ERVW-1Q9UQF0 538 aa10.62□□□□□ -0.71
GTF3C1-201ENST00000356183 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 IRF6O14896 467 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 ARPC5O15511 151 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 DRD5P21918 477 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 GRIA2P42262 883 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 BAIAP2L2Q6UXY1 529 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 GPR142Q7Z601 462 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 NPAS3Q8IXF0 933 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 HS3ST5Q8IZT8 346 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 TMEM185AQ8NFB2 350 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 CYB5D2Q8WUJ1 264 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 KAT6AQ92794 2004 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 RAB8BQ92930 207 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 ARL11Q969Q4 196 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 COQ10AQ96MF6 247 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 ZBTB20Q9HC78 741 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 RNF215Q9Y6U7 377 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 FAM159BA6NKW6 160 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 TFP02787 698 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 AGTR2P50052 363 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 FGFBP1Q14512 234 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.61□□□□□ -0.711e-7■□□□□ 9.7
GTF3C1-201ENST00000356183 LRIT3Q3SXY7 679 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 ZNF486Q96H40 463 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 ZDHHC3Q9NYG2 299 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 SMIM28A0A1B0GU29 152 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 OR12D1P0DN82 309 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 YBEYP58557 167 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 TMEM205Q6UW68 189 aa10.61□□□□□ -0.71
GTF3C1-201ENST00000356183 ZSWIM9Q86XI8 627 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms