RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CDYL2Q8N8U2 506 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 OR5T3Q8NGG3 340 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 WFDC12Q8WWY7 111 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 METTL21AQ8WXB1 218 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 MTERF1Q99551 399 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SH3GL2Q99962 352 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 ZNF717Q9BY31 904 aaPredicted RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 RBCK1Q9BYM8 510 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 ZNF700Q9H0M5 742 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 OR51B5Q9H339 312 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 ACBD3Q9H3P7 528 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 EML4Q9HC35 981 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SRA1Q9HD15 236 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PRDM7Q9NQW5 492 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 P4HTMQ9NXG6 502 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 DAPP1Q9UN19 280 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 G3BP2Q9UN86 482 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PCDHGB7Q9Y5F8 929 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 CPAMD8Q8IZJ3 1885 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SCN3AQ9NY46 2000 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 IGKV3D-11A0A0A0MRZ8 115 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 IGHV1-45A0A0A0MS14 117 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 A0A1B0GTL3 188 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 NPIPB8E9PQR5 432 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 MKRN2OSH3BPM6 223 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PPP6CO00743 305 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 RSL1D1O76021 490 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 ETHE1O95571 254 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 NR2F6P10588 404 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 CPN2P22792 545 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 NOS3P29474 1203 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PPP2R1BP30154 601 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 GSTM5P46439 218 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 HSD17B7P56937 341 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SOX8P57073 446 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 TRA2BP62995 288 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 AIMP2Q13155 320 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 TERF2Q15554 542 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 MINDY4Q4G0A6 757 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SPIN4Q56A73 249 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 VWA5B1Q5TIE3 1220 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 FAM69BQ5VUD6 431 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 KANK2Q63ZY3 851 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 KIRREL2Q6UWL6 708 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SHISA6Q6ZSJ9 500 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 NDUFAF7Q7L592 441 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 CPEB2Q7Z5Q1 589 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 TRIM42Q8IWZ5 723 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PRSS58Q8IYP2 241 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 RNF175Q8N4F7 328 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 ACOT4Q8N9L9 421 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 FAM47BQ8NA70 645 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 CLEC1AQ8NC01 280 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 OR11G2Q8NGC1 345 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 OR6Y1Q8NGX8 325 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PPP1R14CQ8TAE6 165 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 C9orf43Q8TAL5 461 aaPredicted RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 RAB3IL1Q8TBN0 382 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 METTL6Q8TCB7 284 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 EXTL1Q92935 676 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 TSLPQ969D9 159 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 METTL2AQ96IZ6 378 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 CSF3RQ99062 836 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PELOQ9BRX2 385 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 TUBB6Q9BUF5 446 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 MECRQ9BV79 373 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SHCBP1LQ9BZQ2 653 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 DDX31Q9H8H2 851 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 ACSS2Q9NR19 701 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PRTFDC1Q9NRG1 225 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SIRT5Q9NXA8 310 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 MS4A12Q9NXJ0 267 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 NKIRAS1Q9NYS0 192 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 SLC12A4Q9UP95 1085 aa3.73□□□□□ -1.81
CNOT4-202ENST00000356162 PCDHGA9Q9Y5G4 932 aaKnown RBP3.73□□□□□ -1.81
CNOT4-202ENST00000356162 NSG1A0A0A6YYJ2 146 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 TCRBV16S1A1N1A0A5B0 115 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 TMEM120BA0PK00 339 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 SAGE2PA6NJ88 616 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 HMGB1P1B2RPK0 211 aaPredicted RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 SLC28A1O00337 649 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 SAP18O00422 153 aaKnown RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 RTCAO00442 366 aaKnown RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 CYR61O00622 381 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 CLDN4O14493 209 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 UBFD1O14562 309 aaKnown RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 AZIN1O14977 448 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 GUCY1B2O75343 617 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 ULK1O75385 1050 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 EEDO75530 441 aaKnown RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 JRKO75564 520 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 CHEK2O96017 543 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 PRPH2P23942 346 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 GRK2P25098 689 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 TLX1P31314 330 aaPredicted RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 TIA1P31483 386 aaKnown RBP eCLIP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 BUD31P41223 144 aaPredicted RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 NEK2P51955 445 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 EFNA3P52797 238 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 HNRNPH2P55795 449 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms