RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 OR4K1Q8NGD4 311 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 NPRL2Q8WTW4 380 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 HAPLN3Q96S86 360 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 F5H0A9 414 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-201ENST00000356083 C6orf47O95873 294 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 NCEH1Q6PIU2 408 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL27A1-201ENST00000356083 MATN2O00339 956 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 DUX1O43812 170 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 GALTP07902 379 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 ACVR1BP36896 505 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 STON2Q8WXE9 905 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 FAM83CQ9BQN1 747 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 CDH20Q9HBT6 801 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 VSTM2BA6NLU5 285 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 ATP6V1G1O75348 118 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 EIF4EP06730 217 aaKnown RBP16.61■□□□□ 0.25
COL27A1-201ENST00000356083 ABHD2P08910 425 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 MAPK3P27361 379 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-201ENST00000356083 RTP1P59025 263 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 MPP7Q5T2T1 576 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 C16orf78Q8WTQ4 265 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 LOC100130705A0A1B0GUX0 176 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 AIPO00170 330 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 B4GAT1O43505 415 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 CNTN5O94779 1100 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 OR12D1P0DN82 309 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 OR51G2Q8NGK0 314 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 YJEFN3A6XGL0 299 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 PNMTP11086 282 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 GRIA2P42262 883 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 LCLAT1Q6UWP7 414 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 RNF111Q6ZNA4 994 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 PSD4Q8NDX1 1056 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 HAS1Q92839 578 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-201ENST00000356083 ROR2Q01974 943 aaKnown RBP16.61■□□□□ 0.25
COL27A1-201ENST00000356083 GALNT1Q10472 559 aaPredicted RBP16.61■□□□□ 0.25
COL27A1-201ENST00000356083 CCL14Q16627 93 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 COL28A1Q2UY09 1125 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 NDNFQ8TB73 568 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 COG8Q96MW5 612 aa16.61■□□□□ 0.25
COL27A1-201ENST00000356083 A6NHS1 94 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 FGF18O76093 207 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF81P51508 661 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 MCATQ8IVS2 390 aaKnown RBP16.6■□□□□ 0.25
COL27A1-201ENST00000356083 OR51A7Q8NH64 312 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 SLAMF7Q9NQ25 335 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 HSPB6O14558 160 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 OR2B3O76000 313 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 NPBWR1P48145 328 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 ERVK-19Q9WJR5 959 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 NCANO14594 1321 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 TRPM6Q9BX84 2022 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 C2orf74A8MZ97 194 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 APLNRP35414 380 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 OR5K1Q8NHB7 308 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 MAPKAP1Q9BPZ7 522 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 STXBP5LQ9Y2K9 1186 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 TULP2O00295 520 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 EI24O14681 340 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 TMEM225BP0DP42 221 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 PAN3Q58A45 887 aaKnown RBP16.6■□□□□ 0.25
COL27A1-201ENST00000356083 TPRG1Q6ZUI0 275 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 LANCL3Q6ZV70 420 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 CLDN19Q8N6F1 224 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 SAMD11Q96NU1 681 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 SULT4A1Q9BR01 284 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 SLC6A6P31641 620 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 MAB21L1Q13394 359 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 GARNL3Q5VVW2 1013 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 FZD10Q9ULW2 581 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 RIPK3Q9Y572 518 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-201ENST00000356083 GPR149Q86SP6 731 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 TMPRSS12Q86WS5 348 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 THAP4Q8WY91 577 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 FBXL18Q96ME1 805 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 FAM234AQ9H0X4 552 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 CMAHPQ9Y471 501 aa16.6■□□□□ 0.25
COL27A1-201ENST00000356083 SMPD1P17405 629 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 AQP4P55087 323 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 PTPRCAPQ14761 206 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 SH3RF1Q7Z6J0 888 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 ARL14Q8N4G2 192 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 GLB1L3Q8NCI6 653 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-201ENST00000356083 IL1F10Q8WWZ1 152 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 PEX11GQ96HA9 241 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 MED16Q9Y2X0 877 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 NCOA3Q9Y6Q9 1424 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 B4GALT4O60513 344 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 PLCXD2Q0VAA5 305 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 GALNT12Q8IXK2 581 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 CLEC1AQ8NC01 280 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 DYNLRB1Q9NP97 96 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 LOC730098B7Z3J9 87 aa16.59■□□□□ 0.25
COL27A1-201ENST00000356083 TSPAN15O95858 294 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms