RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 C17orf82Q86X59 251 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 ADGRG4Q8IZF6 3080 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 SLC34A3Q8N130 599 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 RAB42Q8N4Z0 105 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 TEX9Q8N6V9 391 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 BMPERQ8N8U9 685 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 OR4D9Q8NGE8 314 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 HMGCLL1Q8TB92 370 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 SKA2Q8WVK7 121 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 OR1E3Q8WZA6 343 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 DLG3Q92796 817 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 UBE2E3Q969T4 207 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 PPP1R14AQ96A00 147 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 RAD51AP1Q96B01 352 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 SLC7A6OSQ96CW6 309 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 REPS1Q96D71 796 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 ANAPC16Q96DE5 110 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 THOC1Q96FV9 657 aaKnown RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 PPP3R2Q96LZ3 170 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 OR52B2Q96RD2 323 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 APOOQ9BUR5 198 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 SLC25A23Q9BV35 468 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 UNKQ9C0B0 810 aaKnown RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 BRINP2Q9C0B6 783 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 OR52A5Q9H2C5 316 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 IPPKQ9H8X2 491 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 FGF22Q9HCT0 170 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 SEMA4BQ9NPR2 832 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 MRPL40Q9NQ50 206 aaKnown RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 OCIAD1Q9NX40 245 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 ZIM2Q9NZV7 527 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 ERRFI1Q9UJM3 462 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 PRPF19Q9UMS4 504 aaKnown RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 SNX6Q9UNH7 406 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 MAPRE3Q9UPY8 281 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 TMEM184BQ9Y519 407 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 OR1A2Q9Y585 309 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 HEBP2Q9Y5Z4 205 aa6.63□□□□□ -1.35
VPS13A-201ENST00000355766 MRPS18BQ9Y676 258 aaKnown RBP6.63□□□□□ -1.35
VPS13A-201ENST00000355766 LRP4O75096 1905 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 AKAP9Q99996 3911 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 RHPN2P1A8MT19 583 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 TMEM233B4DJY2 109 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 E9PBE3 544 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 H0YIV9 168 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 SLC28A1O00337 649 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 OR7A17O14581 309 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PIP5K1BO14986 540 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 INPP4BO15327 924 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 GYG2O15488 501 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ZW10O43264 779 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 RGS14O43566 566 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 KLHL41O60662 606 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ULK1O75385 1050 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 MTX2O75431 263 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 POP7O75817 140 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 STK17BO94768 372 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 FKBP9O95302 570 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 CBX6O95503 412 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 C1orf105O95561 183 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 NPPAP01160 153 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PCCBP05166 539 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 SLC35G4P0C7Q5 338 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 NAT2P11245 290 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PRF1P14222 555 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 NQO1P15559 274 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 GNAZP19086 355 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 FPR2P25090 351 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PIK3R1P27986 724 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 CD1CP29017 333 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ALDH4A1P30038 563 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 HMOX2P30519 316 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 AGTR2P50052 363 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 RAP1GDS1P52306 607 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 CDH13P55290 713 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ITGA1P56199 1179 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 FOXM1Q08050 763 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 CSTF3Q12996 717 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 KLF10Q13118 480 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 RBBP7Q16576 425 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 EIF2S3LQ2VIR3 472 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ATP6AP1LQ52LC2 224 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PDCD4Q53EL6 469 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PRR30Q53SZ7 412 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 PAGE2BQ5JRK9 111 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 CAPN13Q6MZZ7 669 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 C16orf89Q6UX73 402 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 DET1Q7L5Y6 550 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 MILR1Q7Z6M3 343 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 VRK3Q8IV63 474 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 C10orf67Q8IYJ2 551 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 TBC1D21Q8IYX1 336 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 MIER2Q8N344 545 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 AVL9Q8NBF6 648 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-201ENST00000355766 OR5K2Q8NHB8 316 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 METTL6Q8TCB7 284 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ZFPM2Q8WW38 1151 aa6.62□□□□□ -1.35
VPS13A-201ENST00000355766 ATP6V1E2Q96A05 226 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms