RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CCDC120Q96HB5 630 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 NOL11Q9H8H0 719 aaKnown RBP15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 ACTR8Q9H981 624 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 PCTPQ9UKL6 214 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 NPIPA1Q9UND3 350 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 FREM3P0C091 2139 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 A0A088AWK7 358 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 A0A0A6YYD5 115 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 TRGV8A0A0C4DH27 118 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 SYCE1LA8MT33 242 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 FOXO6A8MYZ6 492 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 H0YIV9 168 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 WWP2O00308 870 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 CLDN4O14493 209 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 OR6B1O95007 311 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 IFNA16P05015 189 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 INHBAP08476 426 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF10P21506 573 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 CPN2P22792 545 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 PTGER1P34995 402 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 CA7P43166 264 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 CYB561P49447 251 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 MEOX1P50221 254 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 HK2P52789 917 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ALDH6A1Q02252 535 aaKnown RBP15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 TMEM35AQ53FP2 167 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 LIPJQ5W064 366 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 TMEM178AQ8NBL3 297 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 SLC2A12Q8TD20 617 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ADAMTS18Q8TE60 1221 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ITLN2Q8WWU7 325 aaPredicted RBP15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 TXLNGYQ9BZA5 131 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 OR8D2Q9GZM6 311 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF225Q9UK10 706 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF835Q9Y2P0 537 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 TSC22D4Q9Y3Q8 395 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ASB4Q9Y574 426 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 ANGPTL3Q9Y5C1 460 aa15.54■□□□□ 0.08
PDLIM7-201ENST00000355572 CACNA1CQ13936 2221 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 A0A1W2PR48 441 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 GLOD5A6NK44 160 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 C17orf105B2RV13 164 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 SLC19A2O60779 497 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 OR2J2O76002 312 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 RPS17P08708 135 aaKnown RBP15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 MYBL2P10244 700 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 SOX3P41225 446 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 PIK3CBP42338 1070 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 AP5B1Q2VPB7 878 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 CCDC91Q7Z6B0 441 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 UBE2E3Q969T4 207 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 SCYL1Q96KG9 808 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 RASL10BQ96S79 203 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 FARSBQ9NSD9 589 aaKnown RBP15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF180Q9UJW8 692 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 MRPS33Q9Y291 106 aaKnown RBP15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 HRH3Q9Y5N1 445 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 NINQ8N4C6 2090 aa15.53■□□□□ 0.08
PDLIM7-201ENST00000355572 DNAJC13O75165 2243 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 UNC79Q9P2D8 2635 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 A8MT66 165 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 G3V3Y1 287 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 CCL21O00585 134 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 ASNA1O43681 348 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 ZFAND5O76080 213 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 CLPSP04118 112 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 RHOXF2BP0C7M4 288 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 CDH13P55290 713 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 TNFRSF17Q02223 184 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 FOLH1Q04609 750 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 TGM3Q08188 693 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 STX4Q12846 297 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF750Q32MQ0 723 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 GLE1Q53GS7 698 aaKnown RBP15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 CHSY3Q70JA7 882 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 C9orf40Q8IXQ3 194 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 CYP4Z2PQ8N1L4 340 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 TMEM132CQ8N3T6 1108 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 ZCCHC7Q8N3Z6 543 aaKnown RBP15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 MNS1Q8NEH6 495 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 RGMAQ96B86 450 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 RHOXF2Q9BQY4 288 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 SEMA4BQ9NPR2 832 aaPredicted RBP15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 TEX10Q9NXF1 929 aaPredicted RBP15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 TMEM216Q9P0N5 145 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 MYOTQ9UBF9 498 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 PCDHGA11Q9Y5H2 935 aa15.52■□□□□ 0.08
PDLIM7-201ENST00000355572 A0A087WUV0 522 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 A0A1B0GUH1 482 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 CCDC189A1A4V9 331 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 FCHO1O14526 889 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 RIPK2O43353 540 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 PROM1O43490 865 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 PEX1O43933 1283 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 NADKO95544 446 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 AIFM1O95831 613 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 IGKV3-11P04433 115 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 SERPINB9P50453 376 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 SSR4P51571 173 aa15.51■□□□□ 0.07
PDLIM7-201ENST00000355572 RAP1GDS1P52306 607 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms