RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 BCKDHBP21953 392 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 ALDH3A2P51648 485 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 KCNJ10P78508 379 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF542PQ5EBM4 170 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 USP51Q70EK9 711 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 DNAJC22Q8N4W6 341 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 HSPA12BQ96MM6 686 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF696Q9H7X3 374 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 CLK4Q9HAZ1 481 aaKnown RBP16.28■□□□□ 0.2
VPS13B-201ENST00000355155 THSD1Q9NS62 852 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 SEMA5BQ9P283 1151 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 KLHL20Q9Y2M5 609 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 GSAPA4D1B5 854 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 AQP9O43315 295 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF888P0CJ79 500 aaPredicted RBP16.28■□□□□ 0.2
VPS13B-201ENST00000355155 EFNA1P20827 205 aaPredicted RBP16.28■□□□□ 0.2
VPS13B-201ENST00000355155 CERS1P27544 350 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 NTSP30990 170 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 CAPZBP47756 277 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 SELENOWP63302 87 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 INAVAQ3KP66 663 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
VPS13B-201ENST00000355155 RNF130Q86XS8 419 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 TMBIM1Q969X1 311 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 TRAPPC9Q96Q05 1148 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 DOHHQ9BU89 302 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 EPB41L1Q9H4G0 881 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 CAAP1Q9H8G2 361 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 UTS2RQ9UKP6 389 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 H0YGG7 62 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 PIAS2O75928 621 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 SLITRK5O94991 958 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 MYF6P23409 242 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 GABRA4P48169 554 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 CHN2P52757 468 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 EMP3P54852 163 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ITGA1P56199 1179 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 DSTNP60981 165 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ARF3P61204 181 aaPredicted RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 PPP2R2BQ00005 443 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 SCARB2Q14108 478 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 DAG1Q14118 895 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 EXOSC6Q5RKV6 272 aaKnown RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 NIPAL1Q6NVV3 410 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 PATL1Q86TB9 770 aaKnown RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ZC3H7AQ8IWR0 971 aaKnown RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 KCT2Q8NC54 265 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 CD180Q99467 661 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 FAM149AA5PLN7 773 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 TRIM64A6NGJ6 449 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 TXNDC9O14530 226 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 UBXN7O94888 489 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ALPLP05186 524 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 CHI3L1P36222 383 aaPredicted RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 CDK9P50750 372 aaKnown RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ADARB1P78563 741 aaKnown RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ZXDAP98168 799 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 PRTGQ2VWP7 1150 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ZC3H12BQ5HYM0 836 aaKnown RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 SHQ1Q6PI26 577 aaKnown RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 SFTPA2Q8IWL1 248 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 CNRIP1Q96F85 164 aaPredicted RBP16.27■□□□□ 0.2
VPS13B-201ENST00000355155 PRDM6Q9NQX0 595 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 SEMA3GQ9NS98 782 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 UBAP1Q9NZ09 502 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 ANGPT4Q9Y264 503 aa16.27■□□□□ 0.2
VPS13B-201ENST00000355155 SAC3D1A6NKF1 404 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 E9PQ18 207 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 CST1P01037 141 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 SERPIND1P05546 499 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 TFPTP0C1Z6 253 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 CDK6Q00534 326 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 EPS8Q12929 822 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 C1orf61Q13536 156 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 MAPK11Q15759 364 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 PEAR1Q5VY43 1037 aaPredicted RBP16.27■□□□□ 0.19
VPS13B-201ENST00000355155 C6orf120Q7Z4R8 191 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 HIPK1Q86Z02 1210 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 ZDHHC21Q8IVQ6 265 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 GALNT4Q8N4A0 578 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 UCN3Q969E3 161 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 MAPKAP1Q9BPZ7 522 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 IFT80Q9P2H3 777 aaPredicted RBP16.27■□□□□ 0.19
VPS13B-201ENST00000355155 DAPP1Q9UN19 280 aa16.27■□□□□ 0.19
VPS13B-201ENST00000355155 PLOD2O00469 737 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 PGRMC2O15173 223 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 ASNA1O43681 348 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 SRPX2O60687 465 aaPredicted RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 IFNA14P01570 189 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 NR2F6P10588 404 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 CRATP43155 626 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 AFF3P51826 1226 aaKnown RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 ARSFP54793 590 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 BTN3A2P78410 334 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 C14orf28Q4W4Y0 310 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 CYBRD1Q53TN4 286 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 OR52E8Q6IFG1 317 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 FRMPD2BQ6IN97 320 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 MED25Q71SY5 747 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms