RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ZNF98A6NK75 572 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 OR5K4A6NMS3 321 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 GFYI3L273 518 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 STX16O14662 325 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 AIREO43918 545 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 DFNA5O60443 496 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 GABARAPO95166 117 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 CHRM5P08912 532 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-203ENST00000354674 RD3LP0DJH9 198 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 JUNBP17275 347 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-203ENST00000354674 GADD45AP24522 165 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 CCR5P51681 352 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 HERVK_113P63132 956 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF678Q5SXM1 525 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 FAM124AQ86V42 546 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 COMMD7Q86VX2 200 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 VRK3Q8IV63 474 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 GJD3Q8N144 294 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 ASZ1Q8WWH4 475 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 ERVK-6Q9BXR3 956 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 WDR26Q9H7D7 661 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 CMTM6Q9NX76 183 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 WSB2Q9NYS7 404 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-203ENST00000354674 MUTYHQ9UIF7 546 aa9.65□□□□□ -0.86
SYNE1-203ENST00000354674 SLC16A5O15375 505 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 MATN4O95460 622 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 NUDT1P36639 197 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 ETV1P50549 477 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 LAIR2Q6ISS4 152 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 GPSM1Q86YR5 675 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 SLC44A2Q8IWA5 706 aaPredicted RBP9.65□□□□□ -0.87
SYNE1-203ENST00000354674 CLYBLQ8N0X4 340 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 OXR1Q8N573 874 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF555Q8NEP9 628 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 TSTD1Q8NFU3 115 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 OR2L2Q8NH16 312 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 STON2Q8WXE9 905 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 ASB11Q8WXH4 323 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 SLC7A6Q92536 515 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 KLK6Q92876 244 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 NUDT4Q9NZJ9 180 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 TBC1D24Q9ULP9 559 aa9.65□□□□□ -0.87
SYNE1-203ENST00000354674 PCYT1BQ9Y5K3 369 aaPredicted RBP9.65□□□□□ -0.87
SYNE1-203ENST00000354674 PABPN1LA6NDY0 278 aaKnown RBP9.64□□□□□ -0.87
SYNE1-203ENST00000354674 OR5K3A6NET4 321 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF217O75362 1048 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 SEMA4FO95754 770 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 ANGPTL1O95841 491 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 GRK3P35626 688 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 GDI2P50395 445 aaKnown RBP9.64□□□□□ -0.87
SYNE1-203ENST00000354674 SP140Q13342 867 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 GTF2H3Q13889 308 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 BAK1Q16611 211 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 CDKL4Q5MAI5 379 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 C17orf107Q6ZR85 190 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 FAM86B1Q8N7N1 296 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 ANKRD53Q8N9V6 530 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 OR10Z1Q8NGY1 313 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 ST8SIA4Q92187 359 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 PHF21AQ96BD5 680 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 UHRF1Q96T88 793 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-203ENST00000354674 APOOQ9BUR5 198 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 SLC12A9Q9BXP2 914 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 OR51E2Q9H255 320 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 GSTO2Q9H4Y5 243 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 FAM118AQ9NWS6 357 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 ANAPC2Q9UJX6 822 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 SLC17A4Q9Y2C5 497 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 LGALS8O00214 317 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 IGHV4-34P06331 123 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 C8GP07360 202 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 POU2F1P14859 743 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 PCMT1P22061 227 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 DDOSTP39656 456 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 CDH13P55290 713 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 KIAA1024LP59773 190 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 ZXDAP98168 799 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 IL18R1Q13478 541 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 FGFBP1Q14512 234 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 MFSD13AQ14CX5 517 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 UNC50Q53HI1 259 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 SCIMPQ6UWF3 145 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 SPRED1Q7Z699 444 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 PIK3C3Q8NEB9 887 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 FOXJ1Q92949 421 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 TRIM15Q9C019 465 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 IL1RAPQ9NPH3 570 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 PHPT1Q9NRX4 125 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-203ENST00000354674 OR1A2Q9Y585 309 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 DOCK9Q9BZ29 2069 aa9.64□□□□□ -0.87
SYNE1-203ENST00000354674 PRR19A6NJB7 356 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 TRPC5OSA6NMA1 111 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 ANGPT2O15123 496 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 APBB3O95704 486 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 NPPAP01160 153 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 HRGP04196 525 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 CEACAM5P06731 702 aa9.63□□□□□ -0.87
SYNE1-203ENST00000354674 RPS17P08708 135 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms