RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 EFCAB11Q9BUY7 163 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 POLDIP3Q9BY77 421 aaKnown RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 MMP28Q9H239 520 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 RANGRFQ9HD47 186 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 NFKBIL1Q9UBC1 381 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 NUFIP1Q9UHK0 495 aaKnown RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 CLEC2DQ9UHP7 191 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 PCDHGB7Q9Y5F8 929 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 ALPK3Q96L96 1907 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 ADAM12O43184 909 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 NDUFB5O43674 189 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 TMCC2O75069 709 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 RAB36O95755 333 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF30P17039 623 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 GZMKP49863 264 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 RAB25P57735 213 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 DSTNP60981 165 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 RPS13P62277 151 aaKnown RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 PPP3R1P63098 170 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 FAPQ12884 760 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 RIN1Q13671 783 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 HEPACAMQ14CZ8 416 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 SF1Q15637 639 aaKnown RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 TAF12Q16514 161 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 NDUFA9Q16795 377 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 DUSP6Q16828 381 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 SLC5A12Q1EHB4 618 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 PLK5Q496M5 336 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 C3orf38Q5JPI3 329 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 DCST1Q5T197 706 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 SAXO2Q658L1 398 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 MZT2BQ6NZ67 158 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF767PQ75MW2 155 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 OR4K1Q8NGD4 311 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 C16orf78Q8WTQ4 265 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 TRMT61AQ96FX7 289 aaKnown RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 DIRAS2Q96HU8 199 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 KCTD7Q96MP8 289 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 SOSTQ9BQB4 213 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 TSSK6Q9BXA6 273 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 FAM83DQ9H4H8 585 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 ANKRA2Q9H9E1 313 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 MBD1Q9UIS9 605 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-202ENST00000354537 RAB23Q9ULC3 237 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 GABRQQ9UN88 632 aa10.89□□□□□ -0.67
CAPN9-202ENST00000354537 PIKFYVEQ9Y2I7 2098 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 A0A1W2PQL4 384 aaPredicted RBP10.88□□□□□ -0.67
CAPN9-202ENST00000354537 A0A1W2PRB8 838 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 A8MX80 341 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 FFAR1O14842 300 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 PLA2G10O15496 165 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 ABLIM3O94929 683 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 OLFM2O95897 454 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 C1QBP02746 253 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 MSL3P1P0C860 447 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 CKMT1AP12532 417 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 POU1F1P28069 291 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 HLA-FP30511 346 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 OR1D2P34982 312 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 IL12RB1P42701 662 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 XKP51811 444 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 POLR2LP62875 67 aaKnown RBP10.88□□□□□ -0.67
CAPN9-202ENST00000354537 TPBGQ13641 420 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 VEPH1Q14D04 833 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 MPPE1Q53F39 396 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 SNAP47Q5SQN1 464 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 CCNJQ5T5M9 372 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 ENKURQ8TC29 256 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 ADAMTS19Q8TE59 1207 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 IL4I1Q96RQ9 567 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 TESQ9UGI8 421 aaKnown RBP10.88□□□□□ -0.67
CAPN9-202ENST00000354537 ACAD8Q9UKU7 415 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 KIAA1671Q9BY89 1806 aa10.88□□□□□ -0.67
CAPN9-202ENST00000354537 TMEM129A0AVI4 362 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 TBX19O60806 448 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 POP4O95707 220 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 TSPAN19P0C672 248 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 SRCP12931 536 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 ELAVL4P26378 380 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 FGF9P31371 208 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 SDC2P34741 201 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 NUDT1P36639 197 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 KIR2DL3P43628 341 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 RIPPLY1Q0D2K3 151 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 C2orf80Q0P641 193 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 LMAN2Q12907 356 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 PUM1Q14671 1186 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 GANABQ14697 944 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 GPR19Q15760 415 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 CCDC58Q4VC31 144 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 PLET1Q6UQ28 207 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 SERPINA13PQ6UXR4 307 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 USP30Q70CQ3 517 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 COMMD6Q7Z4G1 85 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF461Q8TAF7 563 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 NELL2Q99435 816 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 COQ7Q99807 217 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 FUZQ9BT04 418 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 GTPBP2Q9BX10 602 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms