RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 EPHA3P29320 983 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 TLX1P31314 330 aaPredicted RBP20.82■□□□□ 0.92
SHMT1-203ENST00000354098 TMPRSS3P57727 454 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 SLC13A2Q13183 592 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 NSDHLQ15738 373 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 SLC9B1Q4ZJI4 515 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 INO80CQ6PI98 192 aaPredicted RBP20.82■□□□□ 0.92
SHMT1-203ENST00000354098 QSOX2Q6ZRP7 698 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 SCUBE1Q8IWY4 988 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 OR4N5Q8IXE1 308 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 ZSCAN1Q8NBB4 408 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 CRELD1Q96HD1 420 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 EGLN2Q96KS0 407 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 PRDM9Q9NQV7 894 aa20.82■□□□□ 0.92
SHMT1-203ENST00000354098 MAP1BP46821 2468 aaKnown RBP20.81■□□□□ 0.92
SHMT1-203ENST00000354098 TRPC5OSA6NMA1 111 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 SOCS6O14544 535 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 CTNSO60931 367 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 IL3P08700 152 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 C8orf89P0DMQ9 161 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 UCNP55089 124 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 HSD17B7P56937 341 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 TRA2BP62995 288 aaKnown RBP20.81■□□□□ 0.92
SHMT1-203ENST00000354098 MC1RQ01726 317 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 ID2Q02363 134 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 CDC20Q12834 499 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 TMEM205Q6UW68 189 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 KIRREL2Q6UWL6 708 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 FNDC5Q8NAU1 212 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 CDC26Q8NHZ8 85 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 CCDC134Q9H6E4 229 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 FAM53CQ9NYF3 392 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 HEY2Q9UBP5 337 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 BAIAP2L1Q9UHR4 511 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 TMED5Q9Y3A6 229 aa20.81■□□□□ 0.92
SHMT1-203ENST00000354098 IGKV3D-11A0A0A0MRZ8 115 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 FGF17O60258 216 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 IGHEP01854 428 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 BCKDHAP12694 445 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 SDC1P18827 310 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 CXADRP78310 365 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 VAC14Q08AM6 782 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 ZNF763Q0D2J5 394 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 ST3GAL2Q16842 350 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 CRTC2Q53ET0 693 aaPredicted RBP20.8■□□□□ 0.92
SHMT1-203ENST00000354098 LARP4Q71RC2 724 aaKnown RBP eCLIP20.8■□□□□ 0.92
SHMT1-203ENST00000354098 MRGPREQ86SM8 312 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 RAB43Q86YS6 212 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 AMER2Q8N7J2 671 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.8■□□□□ 0.92
SHMT1-203ENST00000354098 METTL21AQ8WXB1 218 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 ANKRD9Q96BM1 317 aaPredicted RBP20.8■□□□□ 0.92
SHMT1-203ENST00000354098 THOC1Q96FV9 657 aaKnown RBP20.8■□□□□ 0.92
SHMT1-203ENST00000354098 C5AR2Q9P296 337 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 MMACHCQ9Y4U1 282 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 PCDHA9Q9Y5H5 950 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 IGHV3-20A0A0C4DH32 117 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 MASP2O00187 686 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 GUCY1B2O75343 617 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 ATP1A4Q13733 1029 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 IL23RQ5VWK5 629 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 ANKRD37Q7Z713 158 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 DNAJB14Q8TBM8 379 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 WDR41Q9HAD4 459 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 P4HTMQ9NXG6 502 aa20.8■□□□□ 0.92
SHMT1-203ENST00000354098 ALDH9A1P49189 494 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 FOLH1Q04609 750 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 EMX2Q04743 252 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 EPGNQ6UW88 154 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 OR11G2Q8NGC1 345 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 CLHC1Q8NHS4 586 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 TANKQ92844 425 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 MAELQ96JY0 434 aaKnown RBP20.79■□□□□ 0.92
SHMT1-203ENST00000354098 TSSK3Q96PN8 268 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 CES1P1Q9UKY3 287 aa20.79■□□□□ 0.92
SHMT1-203ENST00000354098 EXO1Q9UQ84 846 aaKnown RBP20.79■□□□□ 0.92
SHMT1-203ENST00000354098 LOC400499M0QZD8 3231 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 A0A1W2PS29 197 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 TCRBV16S1A1N1A0A5B0 115 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 C1orf226A1L170 272 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 BLACEA4D250 179 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 DIAPH2O60879 1101 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 VPS4BO75351 444 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 CYC1P08574 325 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 VIMP08670 466 aaKnown RBP20.78■□□□□ 0.92
SHMT1-203ENST00000354098 PPP2R1BP30154 601 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 AQP5P55064 265 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 EEF1A2Q05639 463 aaKnown RBP20.78■□□□□ 0.92
SHMT1-203ENST00000354098 C2orf80Q0P641 193 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 FAM71E1Q6IPT2 247 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 TMEM132CQ8N3T6 1108 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 LIX1Q8N485 282 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 GFM2Q969S9 779 aaKnown RBP20.78■□□□□ 0.92
SHMT1-203ENST00000354098 NACC2Q96BF6 587 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 OR52B2Q96RD2 323 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 FAIM2Q9BWQ8 316 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 ALOXE3Q9BYJ1 711 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 MYNNQ9NPC7 610 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 FGFR1OP2Q9NVK5 253 aa20.78■□□□□ 0.92
SHMT1-203ENST00000354098 LOC102723996A0A087X1L8 192 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms