RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 IGHG3P01860 377 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CYLC1P35663 651 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AHRP35869 848 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TNNT2P45379 298 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RFX2P48378 723 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AMTP48728 403 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RASSF2P50749 326 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 DNA2P51530 1060 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GEMP55040 296 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RPL24P83731 157 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SPHARQ15513 63 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PDK4Q16654 411 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ARMCX4Q5H9R4 360 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FAM109BQ6ICB4 259 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FUT10Q6P4F1 479 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 DHRS11Q6UWP2 260 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SLC16A9Q7RTY1 509 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 KIAA1328Q86T90 577 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PARP8Q8N3A8 854 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RBMXL3Q8N7X1 1067 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SIDT2Q8NBJ9 832 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 LEMD2Q8NC56 503 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 OR56B2PQ8NGI1 322 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF473Q8WTR7 871 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 HSD17B8Q92506 261 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SLC9A6Q92581 669 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 COQ8BQ96D53 544 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SENP5Q96HI0 755 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FAM218AQ96MZ4 157 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM79Q9BSE2 394 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 LRRCC1Q9C099 1032 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RBM38Q9H0Z9 239 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RNF121Q9H920 327 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NMRK1Q9NWW6 199 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PLCL2Q9UPR0 1127 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 KMT2CQ8NEZ4 4911 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TTC3P53804 2025 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 NSD2O96028 1365 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 DOCK7Q96N67 2140 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 NCAPD2Q15021 1401 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 KIAA1109Q2LD37 5005 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FAM230AA0A1W2PPH8 454 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SHISA7A6NL88 538 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SPRY3O43610 288 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CSDE1O75534 798 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 NGFP01138 241 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 KRT6BP04259 564 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ASNSP08243 561 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CTAGE8P0CG41 777 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TPSB2P20231 275 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ASMTP46597 345 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 KRT6CP48668 564 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 RPS18P62269 152 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 LGALS3BPQ08380 585 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MFAP5Q13361 173 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PLD1Q13393 1074 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 HEPACAMQ14CZ8 416 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TPSAB1Q15661 275 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CCDC57Q2TAC2 916 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TCHHL1Q5QJ38 904 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FIP1L1Q6UN15 594 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MISPQ8IVT2 679 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CTAGE4Q8IX94 777 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 OR2T12Q8NG77 320 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 OR4C3Q8NH37 302 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 AGR3Q8TD06 166 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PIK3R3Q92569 461 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 RAB39BQ96DA2 213 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TCHPQ9BT92 498 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 GPR61Q9BZJ8 451 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 VCX2Q9H322 139 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 TFB2MQ9H5Q4 396 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 GAREM1Q9H706 876 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 VAT1LQ9HCJ6 419 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 UTP6Q9NYH9 597 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF224Q9NZL3 707 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 P2RX2Q9UBL9 471 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 PILRBQ9UKJ0 227 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 NIP7Q9Y221 180 aaKnown RBP eCLIP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 IKBKGQ9Y6K9 419 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FBN1P35555 2871 aaKnown RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CNTNAP1P78357 1384 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 LY6G6EA0A0G2JKS1 128 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 LILRA5A6NI73 299 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ANKRD30BLA7E2S9 258 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CYR61O00622 381 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MAGEB3O15480 346 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 DNAJB6O75190 326 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 OR6A2O95222 327 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SLPIP03973 132 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ACAA1P09110 424 aaPredicted RBP1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MYL6BP14649 208 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 MSH3P20585 1137 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ALDH4A1P30038 563 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 BRCC3P46736 316 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CLDN17P56750 224 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 CEACAM7Q14002 265 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 FHL2Q14192 279 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF260Q3ZCT1 412 aa1.47□□□□□ -2.17
BRCA1-202ENST00000354071 SLC36A3Q495N2 470 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms