RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SMARCD2Q92925 531 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 DACH2Q96NX9 599 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 NRTNQ99748 197 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 LGR4Q9BXB1 951 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 ABCG4Q9H172 646 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 DCSTAMPQ9H295 470 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 SIRT3Q9NTG7 399 aaPredicted RBP21.05■□□□□ 0.96
UPF3A-201ENST00000351487 DUSP12Q9UNI6 340 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 C5orf58C9J3I9 102 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 ADORA3P0DMS8 318 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 CDC42P60953 191 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 RPS26P62854 115 aaKnown RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 TRIM16LQ309B1 348 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 KLHL17Q6TDP4 642 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 NUDT13Q86X67 352 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 RNF217Q8TC41 542 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 ZNF675Q8TD23 568 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 GTPBP3Q969Y2 492 aaKnown RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 ARMC5Q96C12 935 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 NMNAT1Q9HAN9 279 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 TM7SF3Q9NS93 570 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 DSPPQ9NZW4 1301 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 ADAM29Q9UKF5 820 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 CFAP20Q9Y6A4 193 aaKnown RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 NINQ8N4C6 2090 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 FFAR1O14842 300 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 MPZL2O60487 215 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 PDE9AO76083 593 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 MFN2O95140 757 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 STSP08842 583 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 TGFBR1P36897 503 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 CD97P48960 835 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 CLK1P49759 484 aaKnown RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 LIM2P55344 173 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 RPS26P11Q5JNZ5 115 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 TNFAIP8L2Q6P589 184 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 PSRC1Q6PGN9 363 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 C12orf76Q8N812 135 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-201ENST00000351487 MINDY2Q8NBR6 621 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 TMEM19Q96HH6 336 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 DAPK2Q9UIK4 370 aa21.04■□□□□ 0.96
UPF3A-201ENST00000351487 SH3D21A4FU49 640 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 POU2F1P14859 743 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 PSMB5P28074 263 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 ALDH9A1P49189 494 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 WSCD2Q2TBF2 565 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 TAGAPQ8N103 731 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 STX19Q8N4C7 294 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 GPR32P1Q8NGA4 272 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 PSMA8Q8TAA3 256 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 DSN1Q9H410 356 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 THAP10Q9P2Z0 257 aaPredicted RBP21.03■□□□□ 0.96
UPF3A-201ENST00000351487 CHD7Q9P2D1 2997 aa21.03■□□□□ 0.96
UPF3A-201ENST00000351487 TBC1D3BA6NDS4 549 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 IGLON5A6NGN9 336 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 H7BY64 318 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 CACNB4O00305 520 aaPredicted RBP21.02■□□□□ 0.96
UPF3A-201ENST00000351487 NDUFS4O43181 175 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 B4GALT2O60909 372 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 ADAP00813 363 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 GASTP01350 101 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 EPHX1P07099 455 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 CHMP24386 653 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 DRD3P35462 400 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 ST3GAL4Q11206 333 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 FAM46CQ5VWP2 391 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 C9orf43Q8TAL5 461 aaPredicted RBP21.02■□□□□ 0.96
UPF3A-201ENST00000351487 ZBED6CLQ96FA7 236 aaPredicted RBP21.02■□□□□ 0.96
UPF3A-201ENST00000351487 CRELD1Q96HD1 420 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 DHRS1Q96LJ7 313 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 PRAP1Q96NZ9 151 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 ZBTB20Q9HC78 741 aaPredicted RBP21.02■□□□□ 0.96
UPF3A-201ENST00000351487 ACSS1Q9NUB1 689 aaPredicted RBP21.02■□□□□ 0.96
UPF3A-201ENST00000351487 CNOT2Q9NZN8 540 aaKnown RBP21.02■□□□□ 0.96
UPF3A-201ENST00000351487 LAMA3Q16787 3333 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 FEZF1A0PJY2 475 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 GPR89AB7ZAQ6 455 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 KMOO15229 486 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 TMPRSS11DO60235 418 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 SLC35G4P0C7Q5 338 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 GPR89BP0CG08 455 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 GADD45AP24522 165 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 CRISP1P54107 249 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 IFITM3Q01628 133 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 RELAQ04206 551 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 MLC1Q15049 377 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 PDGFRLQ15198 375 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 MAPK11Q15759 364 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 FRMPD2BQ6IN97 320 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 TMC5Q6UXY8 1006 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 FAM92BQ6ZTR7 304 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 C6orf120Q7Z4R8 191 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 RGMAQ96B86 450 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 RHCGQ9UBD6 479 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 HCN2Q9UL51 889 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 A3GALT2U3KPV4 340 aa21.02■□□□□ 0.96
UPF3A-201ENST00000351487 BOLA2-SMG1P6H3BVE0 249 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 HMGN4O00479 90 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 PTHP01270 115 aa21.01■□□□□ 0.95
UPF3A-201ENST00000351487 PORP16435 677 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms