RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 BBS7Q8IWZ6 715 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 C2orf15Q8WU43 125 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 UFD1Q92890 307 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 PTP4A1Q93096 173 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 FBXW5Q969U6 566 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 WBP1Q96G27 269 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SCMH1Q96GD3 660 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 TSSK3Q96PN8 268 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 EGFL8Q99944 293 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ADAM2Q99965 735 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 KATNB1Q9BVA0 655 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SHARPINQ9H0F6 387 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 CWH43Q9H720 699 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 FLRT1Q9NZU1 646 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 NDOR1Q9UHB4 597 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 KIF25Q9UIL4 384 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ZNF175Q9Y473 711 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 A0A0A6YYJ9 748 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 TRBV5-4A0A0C4DH59 114 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 LOC730098B7Z3J9 87 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SLC30A4O14863 429 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 HRO43593 1189 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SCN2BO60939 215 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ENTPD6O75354 484 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 STK16O75716 305 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 TBX18O95935 607 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 RHOCP08134 193 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 TACR1P25103 407 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 STOMP27105 288 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SLC6A1P30531 599 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 EVX1P49640 407 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 GPR15P49685 360 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 AGFG1P52594 562 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 HMGA2P52926 109 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 EPHA5P54756 1037 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 PTPN5P54829 565 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 CDH12P55289 794 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 RPA4Q13156 261 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 MRPL58Q14197 206 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ELOAQ14241 798 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 NFE2L1Q14494 772 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 P2RY14Q15391 338 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 TEAD4Q15561 434 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 IFI44LQ53G44 452 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 FAM26DQ5JW98 314 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SDHAF4Q5VUM1 108 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 LIPKQ5VXJ0 399 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 CD276Q5ZPR3 534 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 C22orf42Q6IC83 251 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 FRMPD2BQ6IN97 320 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 GLB1LQ6UWU2 654 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 TFAP2EQ6VUC0 442 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 LIPIQ6XZB0 460 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 MACC1Q6ZN28 852 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 RTL4Q6ZR62 310 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 LRRC70Q7Z2Q7 622 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ABI3BPQ7Z7G0 1075 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 PDZD3Q86UT5 571 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ZBTB2Q8N680 514 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 ZNF655Q8N720 491 aaPredicted RBP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 OR11H7Q8NGC8 314 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 OR11H4Q8NGC9 324 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 OR9Q2Q8NGE9 314 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SPPL2AQ8TCT8 520 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 CSGALNACT1Q8TDX6 532 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 PHF21AQ96BD5 680 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 FCRL1Q96LA6 429 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 RBP7Q96R05 134 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SPON2Q9BUD6 331 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 CIPCQ9C0C6 399 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 FAM120CQ9NX05 1096 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 CORO2BQ9UQ03 480 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 PCDHB11Q9Y5F2 797 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 KLF2Q9Y5W3 355 aaPredicted RBP9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 SCN8AQ9UQD0 1980 aa9.86□□□□□ -0.83
CHRNA1-202ENST00000348749 DSPPQ9NZW4 1301 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 hCG_1807616A0A1W2PRN6 198 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 ISM1B1AKI9 464 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 TLR5O60602 858 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 MPC2O95563 127 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 ANXA5P08758 320 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 HLA-EP13747 358 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 ITGALP20701 1170 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 PRPS1L1P21108 318 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 KELP23276 732 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 PPIBP23284 216 aaKnown RBP9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 WEE1P30291 646 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 GRK4P32298 578 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 IRS1P35568 1242 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 INPP1P49441 399 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 ATP12AP54707 1039 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 WNT3P56703 355 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 ZNF177Q13360 481 aaPredicted RBP9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 BTN1A1Q13410 526 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 CDH18Q13634 790 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 FGFBP1Q14512 234 aa9.85□□□□□ -0.83
CHRNA1-202ENST00000348749 ZNF284Q2VY69 593 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms