RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 LINC00052Q96N35 136 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 SLC6A18Q96N87 628 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 TMEM121BQ9BXQ6 578 aaPredicted RBP14.65□□□□□ -0.06
LMNA-201ENST00000347559 RBCK1Q9BYM8 510 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 ARHGAP39Q9C0H5 1083 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 FOLH1BQ9HBA9 442 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 PPIEQ9UNP9 301 aaKnown RBP14.65□□□□□ -0.06
LMNA-201ENST00000347559 GSTK1Q9Y2Q3 226 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 C2orf78A6NCI8 922 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 TNFRSF10BO14763 440 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 ANXA3P12429 323 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 KELP23276 732 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 PTX3P26022 381 aaPredicted RBP14.65□□□□□ -0.06
LMNA-201ENST00000347559 PCGF2P35227 344 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 CACNG1Q06432 222 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 BCL2L1Q07817 233 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 SCARB2Q14108 478 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 RNASE12Q5GAN4 147 aaKnown RBP14.65□□□□□ -0.06
LMNA-201ENST00000347559 OR4K1Q8NGD4 311 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 CREB3L1Q96BA8 519 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 MGME1Q9BQP7 344 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 SLC32A1Q9H598 525 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 ASB8Q9H765 288 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 TBC1D17Q9HA65 648 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 FAM120CQ9NX05 1096 aaKnown RBP14.65□□□□□ -0.06
LMNA-201ENST00000347559 CEP350Q5VT06 3117 aa14.65□□□□□ -0.06
LMNA-201ENST00000347559 TEX46H3BTG2 121 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 PRRG1O14668 218 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 OR10H3O60404 316 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ALPIP09923 528 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 RRASP10301 218 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 CD9P21926 228 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 EVX1P49640 407 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 VSX2P58304 361 aaPredicted RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 CRYZQ08257 329 aaKnown RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 KCNC3Q14003 757 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 INSL4Q14641 139 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 TEAD4Q15561 434 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 COL28A1Q2UY09 1125 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 CPTPQ5TA50 214 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 USP45Q70EL2 814 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 MOB2Q70IA6 237 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 SHFQ7M4L6 423 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 DDX53Q86TM3 631 aaKnown RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 CPA6Q8N4T0 437 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 BEST4Q8NFU0 473 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 OR5AK3PQ8NH89 298 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 CSGALNACT1Q8TDX6 532 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 SLC9A6Q92581 669 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 UCN3Q969E3 161 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ABCG5Q9H222 651 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 BEX1Q9HBH7 125 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 ZNF624Q9P2J8 865 aaPredicted RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 SLC9A8Q9Y2E8 581 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 MAP4K5Q9Y4K4 846 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 PCDHB1Q9Y5F3 818 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 TRBV4-1A0A0J9YWV2 114 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 LANCL1O43813 399 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 DHFRP00374 187 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 YBEYP58557 167 aaPredicted RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 CDC42EP1Q00587 391 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 FABP5Q01469 135 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 CLLU1Q5K131 121 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 MEDAGQ5VYS4 303 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 LINGO4Q6UY18 593 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 SORCS2Q96PQ0 1159 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 TMED9Q9BVK6 235 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ATG10Q9H0Y0 220 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 LINC00597Q9H2U6 94 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ENOPH1Q9UHY7 261 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 PCDHB9Q9Y5E1 797 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ARL5CA6NH57 179 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 GABRR3A8MPY1 467 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 HLA-DQB1P01920 261 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 HOXD9P28356 352 aaPredicted RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 GRK4P32298 578 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ACSM2AQ08AH3 577 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 HEPACAMQ14CZ8 416 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 GPR68Q15743 365 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 LGALSLQ3ZCW2 172 aaPredicted RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 FRG2Q64ET8 278 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ACSM2BQ68CK6 577 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 UNC5DQ6UXZ4 953 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 RTL4Q6ZR62 310 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 GPAT4Q86UL3 456 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 ADGRG2Q8IZP9 1017 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 HJURPQ8NCD3 748 aaPredicted RBP14.64□□□□□ -0.07
LMNA-201ENST00000347559 VPS37AQ8NEZ2 397 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 GPR156Q8NFN8 814 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 FRG2BQ96QU4 278 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 RBP7Q96R05 134 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 PDFQ9HBH1 243 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 MARCH2Q9P0N8 246 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 CCDC88CQ9P219 2028 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 SLC22A14Q9Y267 594 aa14.64□□□□□ -0.07
LMNA-201ENST00000347559 SMIM35A0A1B0GVV1 85 aa14.63□□□□□ -0.07
LMNA-201ENST00000347559 TRBC2A0A5B9 178 aa14.63□□□□□ -0.07
LMNA-201ENST00000347559 QSOX1O00391 747 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms