RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 PRKCDQ05655 676 aa13.91□□□□□ -0.18
SMTN-202ENST00000347557 SSX1Q16384 188 aa13.91□□□□□ -0.18
SMTN-202ENST00000347557 PLAG1Q6DJT9 500 aa13.91□□□□□ -0.18
SMTN-202ENST00000347557 METTL3Q86U44 580 aaKnown RBP13.91□□□□□ -0.18
SMTN-202ENST00000347557 OXR1Q8N573 874 aa13.91□□□□□ -0.18
SMTN-202ENST00000347557 GLYATL1Q969I3 302 aa13.91□□□□□ -0.18
SMTN-202ENST00000347557 CRELD1Q96HD1 420 aa13.91□□□□□ -0.18
SMTN-202ENST00000347557 BHLHE41Q9C0J9 482 aaPredicted RBP13.91□□□□□ -0.18
SMTN-202ENST00000347557 CCDC177Q9NQR7 707 aaPredicted RBP13.91□□□□□ -0.18
SMTN-202ENST00000347557 MUTYHQ9UIF7 546 aa13.91□□□□□ -0.18
SMTN-202ENST00000347557 GPR37L1O60883 481 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 TYRP14679 529 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 MANFP55145 182 aaKnown RBP13.9□□□□□ -0.18
SMTN-202ENST00000347557 RUNX1T1Q06455 604 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 TARDBPQ13148 414 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMTN-202ENST00000347557 TIMM50Q3ZCQ8 353 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 CDONQ4KMG0 1287 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 ZDHHC20Q5W0Z9 365 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 CASP12Q6UXS9 341 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 ZNF367Q7RTV3 350 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 LAX1Q8IWV1 398 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 OR9Q1Q8NGQ5 310 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
SMTN-202ENST00000347557 TOR4AQ9NXH8 423 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 LRRTM2O43300 516 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 TGM5O43548 720 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 CSF2P04141 144 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 GABRB1P18505 474 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 XCR1P46094 333 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 METAP1P53582 386 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 LIM2P55344 173 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 CACUL1Q86Y37 369 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 TCEAL8Q8IYN2 117 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 CAMKK1Q8N5S9 505 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 TCEAL4Q96EI5 215 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 C11orf24Q96F05 449 aaPredicted RBP13.9□□□□□ -0.18
SMTN-202ENST00000347557 MMP28Q9H239 520 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 CXorf36Q9H7Y0 433 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 SMURF1Q9HCE7 757 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 ZNF304Q9HCX3 659 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 DMRT3Q9NQL9 472 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 DYRK4Q9NR20 520 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 FBXL12Q9NXK8 326 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 TRPC4Q9UBN4 977 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 ZNF221Q9UK13 617 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 ZSCAN5BA6NJL1 495 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 RFXAPO00287 272 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 AP2A2O94973 939 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 SNX4O95219 450 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 TIMP2P16035 220 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 SSTR4P31391 388 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 IFNA8P32881 189 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 BMPR1AP36894 532 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 NNMTP40261 264 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 HNRNPFP52597 415 aaKnown RBP13.9□□□□□ -0.18
SMTN-202ENST00000347557 PRKAG1P54619 331 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 KCNC3Q14003 757 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 LY6G5CQ5SRR4 150 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 SPATA9Q9BWV2 254 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 ABCB9Q9NP78 766 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 CCDC59Q9P031 241 aaKnown RBP13.9□□□□□ -0.18
SMTN-202ENST00000347557 MKLN1Q9UL63 735 aa13.9□□□□□ -0.18
SMTN-202ENST00000347557 K7ESM1 405 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 TLX2O43763 284 aaPredicted RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 ALDH1A1P00352 501 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 C8AP07357 584 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 C1GALT1C1LP0DN25 315 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 HSD3B1P14060 373 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 HSD3B2P26439 372 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 CNTN1Q12860 1018 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 SEC23BQ15437 767 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 TMPRSS11AQ6ZMR5 421 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 HORMAD2Q8N7B1 307 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 FAM46DQ8NEK8 389 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 OR56A3Q8NH54 315 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 REPS1Q96D71 796 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 YIPF4Q9BSR8 244 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 CPEB1Q9BZB8 566 aaKnown RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 POLR2J3Q9H1A7 115 aaKnown RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 KLHL20Q9Y2M5 609 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 WNT6Q9Y6F9 365 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 DNMT3AQ9Y6K1 912 aaPredicted RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 CDRT1O95170 752 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 PSMA1P25786 263 aaKnown RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 TM4SF4P48230 202 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 FCHO2Q0JRZ9 810 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 PIN1Q13526 163 aaPredicted RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 PUM1Q14671 1186 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMTN-202ENST00000347557 SPHARQ15513 63 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 ZNF630Q2M218 657 aaPredicted RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 DCST1Q5T197 706 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 FAM131AQ6UXB0 335 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 TMC5Q6UXY8 1006 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 CRIPAKQ8N1N5 446 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 CPA6Q8N4T0 437 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 XAGE5Q8WWM1 108 aa13.89□□□□□ -0.19
SMTN-202ENST00000347557 TRMT61AQ96FX7 289 aaKnown RBP13.89□□□□□ -0.19
SMTN-202ENST00000347557 OPALINQ96PE5 141 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms