RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 RXFP3Q9NSD7 469 aa18.66■□□□□ 0.58
HDAC4-201ENST00000345617 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 IL31RAQ8NI17 732 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 ZCCHC10Q8TBK6 192 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 TUBB1Q9H4B7 451 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 APMAPQ9HDC9 416 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 RNF13O43567 381 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 STBD1O95210 358 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 CELP19835 753 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 HTR1EP28566 365 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 CLRN1P58418 232 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 CDK3Q00526 305 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 NPRL3Q12980 569 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 UAP1L1Q3KQV9 507 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 SLC24A5Q71RS6 500 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 SLC35F5Q8WV83 523 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF486Q96H40 463 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-201ENST00000345617 OR1D2P34982 312 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF674Q2M3X9 581 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 HS6ST2Q96MM7 605 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 GHRLQ9UBU3 117 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 FKBPLQ9UIM3 349 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 TOR1AO14656 332 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 SNAP29O95721 258 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 CTNNB1P35222 781 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 RAB11BQ15907 218 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 WDR45BQ5MNZ6 344 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 MINDY1Q8N5J2 469 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 PLEKHA3Q9HB20 300 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 HES2Q9Y543 173 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 PLA2G15Q8NCC3 412 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 WFIKKN2Q8TEU8 576 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 RBP7Q96R05 134 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 P2RX7Q99572 595 aaKnown RBP18.65■□□□□ 0.58
HDAC4-201ENST00000345617 DPCDQ9BVM2 203 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-201ENST00000345617 C19orf25Q9UFG5 118 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-201ENST00000345617 ZFP37Q9Y6Q3 630 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-201ENST00000345617 PRKCHP24723 683 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 GABRR2P28476 465 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 SPHARQ15513 63 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 CEACAM19Q7Z692 300 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 C14orf119Q9NWQ9 140 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 GPR89AB7ZAQ6 455 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 MMP3P08254 477 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 GPR89BP0CG08 455 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 NFATC3Q12968 1075 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 LRRC37A5PQ49AS3 106 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 NLGN2Q8NFZ4 835 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF416Q9BWM5 594 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 EPHA6Q9UF33 1036 aa18.65■□□□□ 0.58
HDAC4-201ENST00000345617 LAG3P18627 525 aa18.64■□□□□ 0.58
HDAC4-201ENST00000345617 SLC36A3Q495N2 470 aa18.64■□□□□ 0.58
HDAC4-201ENST00000345617 LIPJQ5W064 366 aa18.64■□□□□ 0.58
HDAC4-201ENST00000345617 FBXO15Q8NCQ5 510 aaPredicted RBP18.64■□□□□ 0.58
HDAC4-201ENST00000345617 PCED1BQ96HM7 432 aa18.64■□□□□ 0.58
HDAC4-201ENST00000345617 MYRFLQ96LU7 910 aa18.64■□□□□ 0.58
HDAC4-201ENST00000345617 KCNH6Q9H252 994 aa18.64■□□□□ 0.58
HDAC4-201ENST00000345617 CENPMQ9NSP4 180 aa18.64■□□□□ 0.58
HDAC4-201ENST00000345617 PON2Q15165 354 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 TCEANCQ8N8B7 351 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 OR56B2PQ8NGI1 322 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 C3orf49Q96BT1 292 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 ACSS2Q9NR19 701 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 C9J4A7 227 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 MANBAO00462 879 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 EPOP01588 193 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 ZNF16P17020 682 aaPredicted RBP18.64■□□□□ 0.57
HDAC4-201ENST00000345617 CTHP32929 405 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 ETV1P50549 477 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 PEA15Q15121 130 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 C6orf89Q6UWU4 347 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 OR13C3Q8NGS6 347 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 SLC5A11Q8WWX8 675 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 PSMG2Q969U7 264 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 CACNG6Q9BXT2 260 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 PTGES2Q9H7Z7 377 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 CPA4Q9UI42 421 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 LILRA4P59901 499 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 MUS81Q96NY9 551 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 EPHX1P07099 455 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 BEND4Q6ZU67 534 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 C4orf32Q8N8J7 132 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 PDZD7Q9H5P4 517 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 ZNF701Q9NV72 531 aaPredicted RBP18.64■□□□□ 0.57
HDAC4-201ENST00000345617 TOXO94900 526 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 NBPF12Q5TAG4 269 aaPredicted RBP18.64■□□□□ 0.57
HDAC4-201ENST00000345617 NANOGP8Q6NSW7 305 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 GPR149Q86SP6 731 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 ERLEC1Q96DZ1 483 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 TP63Q9H3D4 680 aaPredicted RBP18.64■□□□□ 0.57
HDAC4-201ENST00000345617 NANOGQ9H9S0 305 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 MMP20O60882 483 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 UBBP0CG47 229 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 UBCP0CG48 685 aaKnown RBP18.64■□□□□ 0.57
HDAC4-201ENST00000345617 STC1P52823 247 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 RPS27AP62979 156 aaKnown RBP18.64■□□□□ 0.57
HDAC4-201ENST00000345617 UBA52P62987 128 aaKnown RBP18.64■□□□□ 0.57
HDAC4-201ENST00000345617 MEF2DQ14814 521 aa18.64■□□□□ 0.57
HDAC4-201ENST00000345617 STMND1H3BQB6 276 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms