RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 SEC23BQ15437 767 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 FAM181AQ8N9Y4 354 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 ZFAND1Q8TCF1 268 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 BTN2A2Q8WVV5 523 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 OR4K3Q96R72 315 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 GON7Q9BXV9 100 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 FAM83DQ9H4H8 585 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 FZD3Q9NPG1 666 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 MEN1O00255 615 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 MYL12BO14950 172 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 APOL3O95236 402 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 RHCEP18577 417 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 LHCGRP22888 699 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 SOAT1P35610 550 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 MAN2A2P49641 1150 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 RPS26P11Q5JNZ5 115 aaPredicted RBP16.96■□□□□ 0.31
VHL-202ENST00000345392 PLET1Q6UQ28 207 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 CBARPQ8N350 705 aaPredicted RBP16.96■□□□□ 0.31
VHL-202ENST00000345392 IQCF1Q8N6M8 205 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 OR7G3Q8NG95 312 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 NELL2Q99435 816 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 TRPM5Q9NZQ8 1165 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 REV1Q9UBZ9 1251 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 AP1M2Q9Y6Q5 423 aa16.96■□□□□ 0.31
VHL-202ENST00000345392 TMEM202A6NGA9 273 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 KPNA5O15131 536 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 POLR1CO15160 346 aaPredicted RBP16.95■□□□□ 0.3
VHL-202ENST00000345392 MYCP01106 439 aaPredicted RBP16.95■□□□□ 0.3
VHL-202ENST00000345392 IFNW1P05000 195 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 ERP29P30040 261 aaKnown RBP16.95■□□□□ 0.3
VHL-202ENST00000345392 OR3A3P47888 321 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 EEF1A2Q05639 463 aaKnown RBP16.95■□□□□ 0.3
VHL-202ENST00000345392 PCDH1Q08174 1060 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 LRRC74AQ0VAA2 488 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 NFE2L1Q14494 772 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 GPNMBQ14956 572 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 NCF4Q15080 339 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 GPR19Q15760 415 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 MPEG1Q2M385 716 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 FLYWCH1Q4VC44 716 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 WRAP53Q9BUR4 548 aaKnown RBP16.95■□□□□ 0.3
VHL-202ENST00000345392 BRD9Q9H8M2 597 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 COMMD3Q9UBI1 195 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 ENOPH1Q9UHY7 261 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 ALG5Q9Y673 324 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 OR10H3O60404 316 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 SP3Q02447 781 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 C19orf57Q0VDD7 668 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 BTBD16Q32M84 506 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 CRB2Q5IJ48 1285 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 ARMCX6Q7L4S7 300 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 CAMKMTQ7Z624 323 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 RNF180Q86T96 592 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 GDPD1Q8N9F7 314 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 LMNTD1Q8N9Z9 388 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 OR4M1Q8NGD0 313 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 MSLNLQ96KJ4 702 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 KLF16Q9BXK1 252 aaPredicted RBP16.95■□□□□ 0.3
VHL-202ENST00000345392 UCK2Q9BZX2 261 aa16.95■□□□□ 0.3
VHL-202ENST00000345392 OR2AG2A6NM03 316 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 HEPACAM2A8MVW5 462 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 ARHGEF33A8MVX0 844 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 ALDH1A1P00352 501 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 OSMP13725 252 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 ATP1B2P14415 290 aaPredicted RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 ALAS2P22557 587 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 TIA1P31483 386 aaKnown RBP eCLIP16.94■□□□□ 0.31e-21■■■■■ 26.9
VHL-202ENST00000345392 GZMKP49863 264 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 AP1S2P56377 157 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 CYP4F8P98187 520 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 DDI2Q5TDH0 399 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 CASP12Q6UXS9 341 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 CEACAM20Q6UY09 585 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 DPY19L3Q6ZPD9 716 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 PEX5LQ8IYB4 626 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 SLC38A6Q8IZM9 456 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 GALNT6Q8NCL4 622 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 VN1R3Q9BXE9 311 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 TVP23BQ9NYZ1 205 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 NLKQ9UBE8 527 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 TMCC3Q9ULS5 477 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 MAPRE3Q9UPY8 281 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 SPIN1Q9Y657 262 aaPredicted RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 DSPPQ9NZW4 1301 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 H0YIV9 168 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 SEMA7AO75326 666 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 TNNI3P19429 210 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 IFNA8P32881 189 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 OPRD1P41143 372 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 SNRPGP62308 76 aaKnown RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 RPS26P62854 115 aaKnown RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 MLLT11Q13015 90 aaPredicted RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 TSTA3Q13630 321 aaPredicted RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 C1DQ13901 141 aaKnown RBP16.94■□□□□ 0.3
VHL-202ENST00000345392 PRSS53Q2L4Q9 553 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 ATAT1Q5SQI0 421 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 TXNDC8Q6A555 127 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 TRIM40Q6P9F5 258 aa16.94■□□□□ 0.3
VHL-202ENST00000345392 AGTRAPQ6RW13 159 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms