RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CLVS2Q5SYC1 327 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 NUDT13Q86X67 352 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 NATD1Q8N6N6 113 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 DNAJC5GQ8N7S2 189 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 SYT14Q8NB59 555 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ZDHHC1Q8WTX9 485 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 FKBP10Q96AY3 582 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 THAP7Q9BT49 309 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-202ENST00000345356 SLC27A6Q9Y2P4 619 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 COL1A2P08123 1366 aa11.64□□□□□ -0.55
COL12A1-202ENST00000345356 CACNB4O00305 520 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 PI15O43692 258 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 CYB5AP00167 134 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ALPIP09923 528 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF616Q08AN1 781 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 FAPQ12884 760 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 GPR33Q49SQ1 333 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 DGLUCYQ7Z3D6 616 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 PCSK9Q8NBP7 692 aaKnown RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 RAD9AQ99638 391 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ABCG4Q9H172 646 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 CACNG4Q9UBN1 327 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 C14orf166Q9Y224 244 aaKnown RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 EPOP01588 193 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 CXCR4P61073 352 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 NHSL2Q5HYW2 709 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 WDSUB1Q8N9V3 476 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 TRMT10AQ8TBZ6 339 aaKnown RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 L3HYPDHQ96EM0 354 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 MFFQ9GZY8 342 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 MRPS33Q9Y291 106 aaKnown RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 F5H5P2 479 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 CXCL11O14625 94 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 LRRTM2O43300 516 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 SFTPBP07988 381 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ITGAMP11215 1152 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 AHCYP23526 432 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 UGT2B10P36537 528 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 GALNT1Q10472 559 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 PLAG1Q6DJT9 500 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 RFPL4BQ6ZWI9 263 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ACBD4Q8NC06 268 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 NT5DC2Q9H857 520 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 RPS10P5Q9NQ39 176 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 NLGN3Q9NZ94 848 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 NOX1Q9Y5S8 564 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 EEF1E1-BLOC1S5C9J1V9 151 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 LCMT2O60294 686 aaKnown RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 SEC14L2O76054 403 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 RHCEP18577 417 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ADH6P28332 368 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 CD52P31358 61 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 PYCR1P32322 319 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 MPIP34949 423 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 VSX2P58304 361 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF33AQ06730 810 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 OR4D1Q15615 310 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 GTDC1Q4AE62 458 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 SHFQ7M4L6 423 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 B3GNT7Q8NFL0 401 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 KCNJ9Q92806 393 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ADAP2Q9NPF8 381 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 LOC285095A0A1B0GVY8 99 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 OR6C75A6NL08 312 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 PDYNP01213 254 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 KCNQ1P51787 676 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 RPS13P62277 151 aaKnown RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 WDR53Q7Z5U6 358 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-202ENST00000345356 NPY6RQ99463 290 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 NEUROD4Q9HD90 331 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 ZDHHC3Q9NYG2 299 aa11.63□□□□□ -0.55
COL12A1-202ENST00000345356 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF20P17024 532 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 TPMTP51580 245 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF157P51786 506 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 FAM189BP81408 668 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SMN1Q16637 294 aaKnown RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 GXYLT1Q4G148 440 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 FAM46CQ5VWP2 391 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 CREB3L2Q70SY1 520 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 FAM129CQ86XR2 697 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SLC44A3Q8N4M1 653 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 OR52B6Q8NGF0 335 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 OR5T3Q8NGG3 340 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 CHFRQ96EP1 664 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SPEF2Q9C093 1822 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 LRRC72A6NJI9 287 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 M0R129 80 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 PDHXO00330 501 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 HPGDSO60760 199 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 S1PR4O95977 384 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ALPLP05186 524 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms