RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PIK3CBP42338 1070 aa13□□□□□ -0.33
TPM4-202ENST00000344824 RAB8AP61006 207 aa13□□□□□ -0.33
TPM4-202ENST00000344824 HERC3Q15034 1050 aa13□□□□□ -0.33
TPM4-202ENST00000344824 DEFB134Q4QY38 66 aa13□□□□□ -0.33
TPM4-202ENST00000344824 RNF165Q6ZSG1 346 aa13□□□□□ -0.33
TPM4-202ENST00000344824 LARP4Q71RC2 724 aaKnown RBP eCLIP13□□□□□ -0.33
TPM4-202ENST00000344824 ABHD13Q7L211 337 aa13□□□□□ -0.33
TPM4-202ENST00000344824 MTDHQ86UE4 582 aaKnown RBP13□□□□□ -0.33
TPM4-202ENST00000344824 TTLQ8NG68 377 aa13□□□□□ -0.33
TPM4-202ENST00000344824 TM4SF19Q96DZ7 209 aa13□□□□□ -0.33
TPM4-202ENST00000344824 APIPQ96GX9 242 aa13□□□□□ -0.33
TPM4-202ENST00000344824 PPP3R2Q96LZ3 170 aa13□□□□□ -0.33
TPM4-202ENST00000344824 F2RL3Q96RI0 385 aa13□□□□□ -0.33
TPM4-202ENST00000344824 MS4A8Q9BY19 250 aa13□□□□□ -0.33
TPM4-202ENST00000344824 MRPL1Q9BYD6 325 aaKnown RBP13□□□□□ -0.33
TPM4-202ENST00000344824 BRF2Q9HAW0 419 aa13□□□□□ -0.33
TPM4-202ENST00000344824 ZNF160Q9HCG1 818 aa13□□□□□ -0.33
TPM4-202ENST00000344824 ATP13A2Q9NQ11 1180 aa13□□□□□ -0.33
TPM4-202ENST00000344824 C1orf109Q9NX04 203 aa13□□□□□ -0.33
TPM4-202ENST00000344824 LUZP4Q9P127 313 aa13□□□□□ -0.33
TPM4-202ENST00000344824 VPS29Q9UBQ0 182 aa13□□□□□ -0.33
TPM4-202ENST00000344824 ADGRE2Q9UHX3 823 aa13□□□□□ -0.33
TPM4-202ENST00000344824 ANAPC2Q9UJX6 822 aa13□□□□□ -0.33
TPM4-202ENST00000344824 ZNF451Q9Y4E5 1061 aa13□□□□□ -0.33
TPM4-202ENST00000344824 POLR3HQ9Y535 204 aaPredicted RBP13□□□□□ -0.33
TPM4-202ENST00000344824 PCDHGA9Q9Y5G4 932 aaKnown RBP13□□□□□ -0.33
TPM4-202ENST00000344824 SPENQ96T58 3664 aaKnown RBP12.99□□□□□ -0.33
TPM4-202ENST00000344824 IGLV3-12A0A075B6K2 115 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 A0A0G2JN53 185 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 SERTM1A2A2V5 107 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 URADA6NGE7 173 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 H0YIG0 161 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 J3QKU1 62 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 UBDO15205 165 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 RSL1D1O76021 490 aaKnown RBP12.99□□□□□ -0.33
TPM4-202ENST00000344824 ALOX12P18054 663 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 SERPINB1P30740 379 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 AHRP35869 848 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 RAP1GDS1P52306 607 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 NME5P56597 212 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 SKP1P63208 163 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 ZNF33BQ06732 778 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 AIMP2Q13155 320 aaKnown RBP12.99□□□□□ -0.33
TPM4-202ENST00000344824 PWP1Q13610 501 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 C6orf136Q5SQH8 315 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 KIRREL2Q6UWL6 708 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 PDSS2Q86YH6 399 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 HOMEZQ8IX15 550 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 SHISA5Q8N114 240 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 C1orf52Q8N6N3 182 aaKnown RBP12.99□□□□□ -0.33
TPM4-202ENST00000344824 TRPV3Q8NET8 790 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 OR11G2Q8NGC1 345 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 OR5T3Q8NGG3 340 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 OR51Q1Q8NH59 317 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 CREB3L4Q8TEY5 395 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 METTL21AQ8WXB1 218 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 CMTM7Q96FZ5 175 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 PEX11GQ96HA9 241 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 SERPINI1Q99574 410 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 EBPLQ9BY08 206 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 NMUR2Q9GZQ4 415 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 TRIM33Q9UPN9 1127 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 MYO18BQ8IUG5 2567 aa12.99□□□□□ -0.33
TPM4-202ENST00000344824 NSG1A0A0A6YYJ2 146 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 RTCAO00442 366 aaKnown RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 FCHO1O14526 889 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 SUV39H1O43463 412 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 CLEC3AO75596 197 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 DCTN3O75935 186 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 TBX6O95947 436 aaPredicted RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 ALPPP05187 535 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 ALDOCP09972 364 aaKnown RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 PTX3P26022 381 aaPredicted RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 HNRNPH1P31943 449 aaKnown RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 ERVK-8P63133 956 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 TLE1Q04724 770 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 ACSM2AQ08AH3 577 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 UBAP2LQ14157 1087 aaKnown RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 MYBPC3Q14896 1274 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 RFTN2Q52LD8 501 aaPredicted RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 C10orf62Q5T681 223 aaPredicted RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 KHDRBS2Q5VWX1 349 aaKnown RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 ACSM2BQ68CK6 577 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 RIPOR1Q6ZS17 1223 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 NT5CQ8TCD5 201 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 SARGQ9BW04 601 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 SORBS1Q9BX66 1292 aaKnown RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 KLHL31Q9H511 634 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 NMRK1Q9NWW6 199 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 ARMCX1Q9P291 453 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 MAP10Q9P2G4 905 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 TSC22D4Q9Y3Q8 395 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 CPAMD8Q8IZJ3 1885 aa12.98□□□□□ -0.33
TPM4-202ENST00000344824 RP1L1Q8IWN7 2480 aaPredicted RBP12.98□□□□□ -0.33
TPM4-202ENST00000344824 OR2W5A6NFC9 320 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 GALR3O60755 368 aaPredicted RBP12.97□□□□□ -0.33
TPM4-202ENST00000344824 DPM1O60762 260 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 CEACAM4O75871 244 aa12.97□□□□□ -0.33
TPM4-202ENST00000344824 BMP10O95393 424 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms