RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RPA4Q13156 261 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 MAPK11Q15759 364 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 TBCEQ15813 527 aaPredicted RBP20.36■□□□□ 0.85
CCDC38-201ENST00000344280 KLHL17Q6TDP4 642 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 GPR32P1Q8NGA4 272 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 SLC38A4Q969I6 547 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 EXOSC8Q96B26 276 aaKnown RBP20.36■□□□□ 0.85
CCDC38-201ENST00000344280 TMEM19Q96HH6 336 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 ALPK1Q96QP1 1244 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 SIRT3Q9NTG7 399 aaPredicted RBP20.36■□□□□ 0.85
CCDC38-201ENST00000344280 AHSPQ9NZD4 102 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 TRBV4-1A0A0J9YWV2 114 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 LCMT2O60294 686 aaKnown RBP20.36■□□□□ 0.85
CCDC38-201ENST00000344280 CCNB2O95067 398 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 STATHP02808 62 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 OPRD1P41143 372 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 KCNC4Q03721 635 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 TIGD6Q17RP2 521 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 LEXMQ3ZCV2 418 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 SMARCD2Q92925 531 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 PPP1R14BQ96C90 147 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 AIF1LQ9BQI0 150 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 HDAC8Q9BY41 377 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 ZNF556Q9HAH1 456 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 NMNAT1Q9HAN9 279 aaPredicted RBP20.36■□□□□ 0.85
CCDC38-201ENST00000344280 WASH6PQ9NQA3 447 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 IRAK4Q9NWZ3 460 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 MS4A12Q9NXJ0 267 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 OSGIN1Q9UJX0 560 aa20.36■□□□□ 0.85
CCDC38-201ENST00000344280 SPTBN5Q9NRC6 3674 aaKnown RBP20.35■□□□□ 0.85
CCDC38-201ENST00000344280 C2orf16Q68DN1 1984 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 DENND4AQ7Z401 1863 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 PDPK1O15530 556 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 PTHP01270 115 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 IFNW1P05000 195 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 RHCEP18577 417 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 GADD45AP24522 165 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 INAQ16352 499 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 SOWAHCQ53LP3 525 aaPredicted RBP20.35■□□□□ 0.85
CCDC38-201ENST00000344280 UBE3DQ7Z6J8 389 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 RBM45Q8IUH3 476 aaKnown RBP20.35■□□□□ 0.85
CCDC38-201ENST00000344280 FAM20CQ8IXL6 584 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 MYDGFQ969H8 173 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 ZHX1-C8orf76Q96EF9 292 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 WDR12Q9GZL7 423 aaKnown RBP20.35■□□□□ 0.85
CCDC38-201ENST00000344280 FBXO8Q9NRD0 319 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 SPATA7Q9P0W8 599 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 SERGEFQ9UGK8 458 aa20.35■□□□□ 0.85
CCDC38-201ENST00000344280 C1QTNF3-AMACRE9PGA6 284 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 MID1O15344 667 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 CAPN5O15484 640 aaPredicted RBP20.34■□□□□ 0.85
CCDC38-201ENST00000344280 CTSKP43235 329 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 CCR8P51685 355 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 PCBP4P57723 403 aaKnown RBP20.34■□□□□ 0.85
CCDC38-201ENST00000344280 ST3GAL4Q11206 333 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 ZNF770Q6IQ21 691 aaPredicted RBP20.34■□□□□ 0.85
CCDC38-201ENST00000344280 PAGE2Q7Z2X7 111 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 SERHL2Q9H4I8 314 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 RNF167Q9H6Y7 350 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 PELI2Q9HAT8 420 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 DUSP12Q9UNI6 340 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 C5orf67F2Z3F1 127 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 OR1F1O43749 312 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 AIREO43918 545 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 SEMA3DO95025 777 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 PCDH8O95206 1070 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 CHMP24386 653 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 REEP5Q00765 189 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 C6orf120Q7Z4R8 191 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 ZNF675Q8TD23 568 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 OR5P2Q8WZ92 322 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 CHFRQ96EP1 664 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 DCSTAMPQ9H295 470 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 XKR8Q9H6D3 395 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 IMPAD1Q9NX62 359 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 COL4A3Q01955 1670 aa20.34■□□□□ 0.85
CCDC38-201ENST00000344280 ATG2BQ96BY7 2078 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 IGKV1-8A0A0C4DH67 115 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 TMEM247A6NEH6 219 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 GRXCR1A8MXD5 290 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 HMGN4O00479 90 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 MFN2O95140 757 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 IGFBP1P08833 259 aaPredicted RBP20.33■□□□□ 0.85
CCDC38-201ENST00000344280 ADORA3P0DMS8 318 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 PTGER1P34995 402 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 ARHGAP19Q14CB8 494 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 SEC23BQ15437 767 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.33■□□□□ 0.85
CCDC38-201ENST00000344280 OLIG3Q7RTU3 272 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 DENND6BQ8NEG7 585 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 B3GNT7Q8NFL0 401 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 OR4D11Q8NGI4 311 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 KLK6Q92876 244 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 AICDAQ9GZX7 198 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 FTSJ1Q9UET6 329 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 KCND3Q9UK17 655 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 CKAP5Q14008 2032 aa20.33■□□□□ 0.85
CCDC38-201ENST00000344280 PRAMEF27A3QJZ7 478 aa20.33■□□□□ 0.84
CCDC38-201ENST00000344280 A8MVJ9 347 aa20.33■□□□□ 0.84
CCDC38-201ENST00000344280 C5orf58C9J3I9 102 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms