RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 GLOD5A6NK44 160 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 E9PQ18 207 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 LCMT2O60294 686 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 B4GALT2O60909 372 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 PRKRAO75569 313 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 KAT7O95251 611 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 RPN2P04844 631 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 GJA4P35212 333 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 CTSKP43235 329 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 PUM1Q14671 1186 aaKnown RBP eCLIP14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 LEXMQ3ZCV2 418 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 OLIG3Q7RTU3 272 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 PAGE2Q7Z2X7 111 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 C7orf61Q8IZ16 206 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 RHOXF1Q8NHV9 184 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 SMPDL3AQ92484 453 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 LGALS12Q96DT0 336 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 ALPK1Q96QP1 1244 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 ROGDIQ9GZN7 287 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 PLEKHM1Q9Y4G2 1056 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 A0A1W2PPV9 198 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 EFCAB9A8MZ26 197 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 C5orf67F2Z3F1 127 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 NDUFS4O43181 175 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 GASTP01350 101 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 CLK1P49759 484 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 LIM2P55344 173 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 HEPACAMQ14CZ8 416 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 DGUOKQ16854 277 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 RGS21Q2M5E4 152 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 AGBL4Q5VU57 503 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 C6orf120Q7Z4R8 191 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 HDDC3Q8N4P3 179 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 C17orf62Q9BQA9 187 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 MENTQ9BUN1 341 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 ITPAQ9BY32 194 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 RHBGQ9H310 441 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 IGFLR1Q9H665 355 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 WDR26Q9H7D7 661 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 ZBTB20Q9HC78 741 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 ERGIC3Q9Y282 383 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 HCN4Q9Y3Q4 1203 aa14.16□□□□□ -0.14
VIPAS39-202ENST00000343765 MUC22E2RYF6 1773 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 TRBV4-1A0A0J9YWV2 114 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 FUCA1P04066 466 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ZNF12P17014 697 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 REEP5Q00765 189 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ZNF846Q147U1 533 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 IRF4Q15306 451 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 TBC1D25Q3MII6 688 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 VITQ6UXI7 678 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 DEF8Q6ZN54 512 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ZNF554Q86TJ5 538 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 RBM45Q8IUH3 476 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 STX19Q8N4C7 294 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 GANCQ8TET4 914 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 OR5P2Q8WZ92 322 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 RAB7BQ96AH8 199 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 NEURL3Q96EH8 262 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 SIGLEC11Q96RL6 698 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 NMNAT1Q9HAN9 279 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 PELI2Q9HAT8 420 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 HMG20AQ9NP66 347 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 MS4A12Q9NXJ0 267 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 THAP10Q9P2Z0 257 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ICKQ9UPZ9 632 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 NUP210Q8TEM1 1887 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 CLCA1A8K7I4 914 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 BOLA2-SMG1P6H3BVE0 249 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 FFAR1O14842 300 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 HSMCR30P0CW71 290 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ALPPL2P10696 532 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ERGP11308 486 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 HOXB3P14651 431 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 CXCR2P25025 360 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 SEC13P55735 322 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ELOAQ14241 798 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 PTGES3Q15185 160 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 CST6Q15828 149 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 TIGD6Q17RP2 521 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 SAXO2Q658L1 398 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 LSRQ86X29 649 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 NUDT13Q86X67 352 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 OR5D16Q8NGK9 328 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 DYNC2LI1Q8TCX1 351 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 MYDGFQ969H8 173 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 ZHX1-C8orf76Q96EF9 292 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 RSPO3Q9BXY4 272 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 WASH6PQ9NQA3 447 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 DNAAF2Q9NVR5 837 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 STON1Q9Y6Q2 735 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 F5P12259 2224 aa14.15□□□□□ -0.14
VIPAS39-202ENST00000343765 OR52A4PA6NMU1 304 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 KMOO15229 486 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 SEMA3DO95025 777 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 SOX14O95416 240 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 CDK1P06493 297 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms