RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 AZIN2Q96A70 460 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 FCRL1Q96LA6 429 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SEZ6LQ9BYH1 1024 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 MRPS30Q9NP92 439 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 RNF146Q9NTX7 359 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF701Q9NV72 531 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 ROBO3Q96MS0 1386 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ABCC6O95255 1503 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ERVV-1B6SEH8 477 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PIP5K1BO14986 540 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 HRGP04196 525 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 GAAP10253 952 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PRPS2P11908 318 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PTPN2P17706 415 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 LPOP22079 712 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 ATP5A1P25705 553 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 GDI1P31150 447 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PDSS1Q5T2R2 415 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 FAM71AQ8IYT1 594 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 FAM156AQ8NDB6 213 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF439Q8NDP4 499 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CLIP3Q96DZ5 547 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TMEM41AQ96HV5 264 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PYURFQ96I23 114 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SLC35A5Q9BS91 424 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PTGES2Q9H7Z7 377 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 EMC7Q9NPA0 242 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 BANF1O75531 89 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 C2P06681 752 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CPT2P23786 658 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 RPS19P39019 145 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 AQP2P41181 271 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 FRKP42685 505 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 EEFSECP57772 596 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 ACY1Q03154 408 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 EMC10Q5UCC4 262 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CNIH2Q6PI25 160 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 C17orf64Q86WR6 236 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ENTHD1Q8IYW4 607 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CMTM1Q8IZ96 169 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 COX18Q8N8Q8 333 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ADAMTS15Q8TE58 950 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 FRS2Q8WU20 508 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CPB2Q96IY4 423 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SNX18Q96RF0 628 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PKP2Q99959 881 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZDHHC11Q9H8X9 412 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PPP1R14DQ9NXH3 145 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TVP23BQ9NYZ1 205 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 OR6C2Q9NZP2 312 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 P2RX2Q9UBL9 471 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NDRG3Q9UGV2 375 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PURGQ9UJV8 347 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 STXBP5LQ9Y2K9 1186 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CSPG4Q6UVK1 2322 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 DISP2A7MBM2 1401 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ADGRB2O60241 1585 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 DDCP20711 480 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 S1PR1P21453 382 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 BMP8BP34820 402 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PTPAQ15257 358 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 GRIK4Q16099 956 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 BLOC1S3Q6QNY0 202 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 BMP8AQ7Z5Y6 402 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF546Q86UE3 836 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SETD7Q8WTS6 366 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 C17orf62Q9BQA9 187 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TIMM29Q9BSF4 260 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 HRH4Q9H3N8 390 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 DDX4Q9NQI0 724 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 SLC2A9Q9NRM0 540 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 YARS2Q9Y2Z4 477 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 POM121CA8CG34 1229 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ZNF736B4DX44 427 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 BBOX1O75936 387 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CD63P08962 238 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CDK4P11802 303 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 GJA5P36382 358 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SSR2P43308 183 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SULT1A2P50226 295 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CRISP3P54108 245 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 HSD11B2P80365 405 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 BCL2L1Q07817 233 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 EIF4HQ15056 248 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 COMMD1Q8N668 190 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CLRN3Q8NCR9 226 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SLAIN1Q8ND83 568 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 HS6ST2Q96MM7 605 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 DHRS9Q9BPW9 319 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 VAMP8Q9BV40 100 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 MIR1-1HGQ9H1L0 117 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TSPAN10Q9H1Z9 355 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 EIF2B3Q9NR50 452 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 LIN7CQ9NUP9 197 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 TECTAO75443 2155 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NUP153P49790 1475 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 ACOT7O00154 380 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 RNF13O43567 381 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CKMP06732 381 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 ARSFP54793 590 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms