RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PPP2R2BQ00005 443 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 TAF13Q15543 124 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 SMN1Q16637 294 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 FAM214AQ32MH5 1076 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 LHFPL3Q86UP9 236 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 RNF175Q8N4F7 328 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 TESCQ96BS2 214 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 LRR1Q96L50 414 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 C5orf34Q96MH7 638 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 CD180Q99467 661 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 TMED9Q9BVK6 235 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 MKKSQ9NPJ1 570 aaPredicted RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 ABCD2Q9UBJ2 740 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 MRTO4Q9UKD2 239 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 ZNF860A6NHJ4 632 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 ANHXE9PGG2 379 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 FXYD1O00168 92 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 DLGAP1O14490 977 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PRLP01236 227 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PGDP52209 483 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 HK3P52790 923 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 DCDC1P59894 354 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 ACVR1Q04771 509 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 FCHO2Q0JRZ9 810 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.88□□□□□ -1.31
VCAN-202ENST00000342785 PAPD5Q8NDF8 572 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 OR9Q2Q8NGE9 314 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 OR51G2Q8NGK0 314 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 BBS10Q8TAM1 723 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 GRHL3Q8TE85 626 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 BTNL2Q9UIR0 455 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 NUMA1Q14980 2115 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PRAMEF33A0A0G2JMD5 474 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 GABRR3A8MPY1 467 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 CACNG3O60359 315 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PRAMEF10O60809 474 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 NUDT7P0C024 238 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 HLA-FP30511 346 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 SHMT2P34897 504 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 MC1RQ01726 317 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 DSG2Q14126 1118 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 RFLNAQ6ZTI6 216 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 HTR3DQ70Z44 454 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PTRH1Q86Y79 214 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 C7orf61Q8IZ16 206 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 MYLIPQ8WY64 445 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 RAB7BQ96AH8 199 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 NARS2Q96I59 477 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 KCNK12Q9HB15 430 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 KIAA1551Q9HCM1 1747 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 BTN3A3O00478 584 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 HNRNPA0Q13151 305 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 CBLBQ13191 982 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 KHDRBS2Q5VWX1 349 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 CPXM2Q8N436 756 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 METTL25Q8N6Q8 603 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 TRMT2BQ96GJ1 504 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 CNDP2Q96KP4 475 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 OR51I1Q9H343 314 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PHF11Q9UIL8 331 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 PCDHGA10Q9Y5H3 936 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 ISPDA4D126 451 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 H7C0S8 307 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 OR7A17O14581 309 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 MMP2P08253 660 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 TFPIP10646 304 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 SYN1P17600 705 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 C21orf33P30042 268 aaPredicted RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 ACSL1P33121 698 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 DEFB134Q4QY38 66 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 UNC5DQ6UXZ4 953 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 ANKRD13BQ86YJ7 626 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 NUDT8Q8WV74 236 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 S100A13Q99584 98 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 RAD9AQ99638 391 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 ABCG2Q9UNQ0 655 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 MED31Q9Y3C7 131 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 REM1O75628 298 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ALDH3B2P48448 385 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 CSNK1DP48730 415 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 HMBOX1Q6NT76 420 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ZNF480Q8WV37 535 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SECISBP2Q96T21 854 aaKnown RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 CPPED1Q9BRF8 314 aaPredicted RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 TRIM36Q9NQ86 728 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 MARCH5Q9NX47 278 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 A0A1B0GTW7 788 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 KAT7O95251 611 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 HNRNPA1P09651 372 aaKnown RBP eCLIP6.87□□□□□ -1.31
VCAN-202ENST00000342785 AKT2P31751 481 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 BMP8BP34820 402 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 FAUP35544 74 aaKnown RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 CLK3P49761 638 aaKnown RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 SUOXP51687 545 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SGSHP51688 502 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 MLLT10P55197 1068 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 LIPIQ6XZB0 460 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SLC36A4Q6YBV0 504 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms