RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 KCNJ13O60928 360 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF35P13682 527 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 CD1DP15813 335 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 PORP16435 677 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-202ENST00000342494 RORAP35398 523 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 AP2S1P53680 142 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-202ENST00000342494 TMEM35AQ53FP2 167 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 SWT1Q5T5J6 900 aaKnown RBP14.4□□□□□ -0.1
UBE3B-202ENST00000342494 ABHD17BQ5VST6 288 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 NCEH1Q6PIU2 408 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 NXPE4Q6UWF7 544 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 BEND4Q6ZU67 534 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 TCEANCQ8N8B7 351 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 CCDC120Q96HB5 630 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 HSPA12BQ96MM6 686 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 ERMAPQ96PL5 475 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-202ENST00000342494 DNAJC27Q9NZQ0 273 aa14.4□□□□□ -0.1
UBE3B-202ENST00000342494 LOC100509620A0A075B734 347 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 PROS1P07225 676 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 BCKDHAP12694 445 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ZER1Q7Z7L7 766 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ZNF761Q86XN6 746 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-202ENST00000342494 LIX1LQ8IVB5 337 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 DNAAF1Q8NEP3 725 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ITPAQ9BY32 194 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 PARPBPQ9NWS1 579 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SLC22A1O15245 554 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 PPM1BO75688 479 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SOX30O94993 753 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 BPNT1O95861 308 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ITIH1P19827 911 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SPINT3P49223 89 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 GPR143P51810 404 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SLC18A1P54219 525 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 DNASE1L3Q13609 305 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 CDK10Q15131 360 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ZNF572Q7Z3I7 529 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ASB15Q8WXK1 588 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SLC7A6OSQ96CW6 309 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-202ENST00000342494 LMO7Q8WWI1 1683 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SH3PXD2BA1X283 911 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 VSTM2BA6NLU5 285 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SNX29P2Q8IUI4 249 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 TMEM80Q96HE8 168 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 C12orf4Q9NQ89 552 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 MED11Q9P086 117 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 F8A1P23610 371 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ARSFP54793 590 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ACY1Q03154 408 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 MVKQ03426 396 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 ST3GAL4Q11206 333 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 GALNT10Q86SR1 603 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 TMEM40Q8WWA1 233 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 OSBPL7Q9BZF2 842 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 SLC5A7Q9GZV3 580 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 DUOX1Q9NRD9 1551 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 PCDHGA6Q9Y5G7 932 aa14.39□□□□□ -0.11
UBE3B-202ENST00000342494 IL1RNP18510 177 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 NR0B1P51843 470 aaKnown RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 DLX2Q07687 328 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 DOC2AQ14183 400 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 NFE2L1Q14494 772 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SEC23BQ15437 767 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 MORN1Q5T089 497 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 C3orf33Q6P1S2 294 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 TCEAL8Q8IYN2 117 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PHTF2Q8N3S3 785 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 GDE1Q9NZC3 331 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SH3D21A4FU49 640 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 HRGP04196 525 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 HOXA11P31270 313 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 GGT2P36268 569 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 MLLT10P55197 1068 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 GALK2Q01415 458 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 FGL2Q14314 439 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 OR4C11Q6IEV9 310 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SLC25A25Q6KCM7 469 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PLEKHG7Q6ZR37 379 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SSX6Q7RTT6 188 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 OR8K3Q8NH51 312 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 EIF3KQ9UBQ5 218 aaKnown RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PIK3C2AO00443 1686 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 MRPL3P09001 348 aaKnown RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SRCP12931 536 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 S100A10P60903 97 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 UBE2NP61088 152 aaKnown RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 GAS6Q14393 721 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 NKAPLQ5M9Q1 402 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 KIAA0895LQ68EN5 471 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 GPR137CQ8N3F9 429 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 DOK4Q8TEW6 326 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PRR11Q96HE9 360 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-202ENST00000342494 RANBP9Q96S59 729 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 SLC6A15Q9H2J7 730 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 ABCD2Q9UBJ2 740 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PTGESO14684 152 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 LATO43561 262 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 IRF2P14316 349 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 DRD2P14416 443 aa14.38□□□□□ -0.11
UBE3B-202ENST00000342494 PRKACGP22612 351 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms