RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PRKYO43930 277 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 EDNRBP24530 442 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 PCGF2P35227 344 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 MTAPQ13126 283 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 CCDC85BQ15834 202 aaPredicted RBP17.71■□□□□ 0.42
SMPD1-201ENST00000342245 DGKKQ5KSL6 1271 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 FAM198BQ6UWH4 519 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 USP45Q70EL2 814 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 ABI3BPQ7Z7G0 1075 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 DENND1CQ8IV53 801 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.42
SMPD1-201ENST00000342245 OR13C4Q8NGS5 318 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 TM9SF4Q92544 642 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 EDEM1Q92611 657 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 KCNJ9Q92806 393 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 NLNQ9BYT8 704 aa17.71■□□□□ 0.42
SMPD1-201ENST00000342245 PITHD1Q9GZP4 211 aaPredicted RBP17.71■□□□□ 0.42
SMPD1-201ENST00000342245 H7C2Y5 167 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 GPR171O14626 319 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 IRS1P35568 1242 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 HMGA2P52926 109 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 SRSF11Q05519 484 aaKnown RBP17.7■□□□□ 0.42
SMPD1-201ENST00000342245 C2orf80Q0P641 193 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 RNF180Q86T96 592 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 TEX26Q8N6G2 289 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 SIDT2Q8NBJ9 832 aaKnown RBP17.7■□□□□ 0.42
SMPD1-201ENST00000342245 OR4D10Q8NGI6 311 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 CD200R1Q8TD46 325 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 C1GALT1C1Q96EU7 318 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 NTMT1Q9BV86 223 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 ABCG5Q9H222 651 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 RNF19AQ9NV58 838 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 TEX13CA0A0J9YWL9 993 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 GTPBP1O00178 669 aaKnown RBP17.7■□□□□ 0.42
SMPD1-201ENST00000342245 RNGTTO60942 597 aaKnown RBP17.7■□□□□ 0.42
SMPD1-201ENST00000342245 GLUD1P00367 558 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 H2AFB1P0C5Y9 115 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 H2AFB2P0C5Z0 115 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 BPIP17213 487 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 NNMTP40261 264 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 RPL6Q02878 288 aaKnown RBP17.7■□□□□ 0.42
SMPD1-201ENST00000342245 TPBGQ13641 420 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 CDKL4Q5MAI5 379 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 ADAMTS14Q8WXS8 1223 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 ACTR10Q9NZ32 417 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 AKT3Q9Y243 479 aa17.7■□□□□ 0.42
SMPD1-201ENST00000342245 RLFQ13129 1914 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 SRCAPQ6ZRS2 3230 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 PRMT3O60678 531 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 UGT2B7P16662 529 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 CXCL3P19876 107 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 POU1F1P28069 291 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 GABRA5P31644 462 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 SLC6A4P31645 630 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 GSTM5P46439 218 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 TTPAP49638 278 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 MAXP61244 160 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 IL10RBQ08334 325 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 MAP4K2Q12851 820 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 CYP27C1Q4G0S4 372 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 CRTC2Q53ET0 693 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-201ENST00000342245 WASH2PQ6VEQ5 465 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 TSEN54Q7Z6J9 526 aaKnown RBP17.69■□□□□ 0.42
SMPD1-201ENST00000342245 MICALL2Q8IY33 904 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 FTMTQ8N4E7 242 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 CHFRQ96EP1 664 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 ACTR6Q9GZN1 396 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 ZNF275Q9NSD4 429 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-201ENST00000342245 IRGMA1A4Y4 181 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 PIPSLA2A3N6 862 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 FFAR3O14843 346 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 GPR42O15529 346 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 FFAR2O15552 330 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 PEX10O60683 326 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 RAB36O95755 333 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 NR2F6P10588 404 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 ITPKAP23677 461 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 PRPH2P23942 346 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 CALCRP30988 508 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-201ENST00000342245 DHODHQ02127 395 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 LRRC32Q14392 662 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 NTRK2Q16620 822 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 OCLNQ16625 522 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 TMEM151BQ8IW70 566 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 GPR65Q8IYL9 337 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 NUDT15Q9NV35 164 aa17.69■□□□□ 0.42
SMPD1-201ENST00000342245 FAM120CQ9NX05 1096 aaKnown RBP17.69■□□□□ 0.42
SMPD1-201ENST00000342245 SPIN1Q9Y657 262 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-201ENST00000342245 COL4A4P53420 1690 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-201ENST00000342245 TRDV1A0A1B0GX56 115 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 PDCD5O14737 125 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 PAGE1O75459 146 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 IGLV3-25P01717 112 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 ZNF621Q6ZSS3 439 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 MCATQ8IVS2 390 aaKnown RBP17.68■□□□□ 0.42
SMPD1-201ENST00000342245 TRPV1Q8NER1 839 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 ARRDC2Q8TBH0 407 aa17.68■□□□□ 0.42
SMPD1-201ENST00000342245 THAP7Q9BT49 309 aaPredicted RBP17.68■□□□□ 0.42
SMPD1-201ENST00000342245 C1QTNF6Q9BXI9 259 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms