RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 PATE1Q8WXA2 126 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FAR2Q96K12 515 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FANCD2OSQ96PS1 177 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SLC38A3Q99624 504 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 GTPBP2Q9BX10 602 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TBC1D10AQ9BXI6 508 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MS4A8Q9BY19 250 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF385DQ9H6B1 395 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SYNPO2LQ9H987 977 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 GIN1Q9NXP7 522 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TAS2R7Q9NYW3 318 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZFP69BQ9UJL9 534 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TLK1Q9UKI8 766 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TMED5Q9Y3A6 229 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 USP34Q70CQ2 3546 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 KIAA1549Q9HCM3 1950 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 CACNA1GO43497 2377 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TRIOO75962 3097 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ATRXP46100 2492 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 A0A1W2PPM1 405 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 OR6C74A6NCV1 312 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SLCO1B7G3V0H7 640 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF195O14628 629 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SLC22A2O15244 555 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SMIM24O75264 130 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 OTCP00480 354 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 LPLP06858 475 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MYZAPP0CAP1 466 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 NEFHP12036 1026 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 IFNGR1P15260 489 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TYK2P29597 1187 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 RPA3P35244 121 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SLC12A2P55011 1212 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MANFP55145 182 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ITGA1P56199 1179 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TXNL4AP83876 142 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 IL9RQ01113 521 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HSPA14Q0VDF9 509 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TBL3Q12788 808 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 C1orf61Q13536 156 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 C16orf72Q14CZ0 275 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SPDYAQ5MJ70 313 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 DNTTIP2Q5QJE6 756 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TMTC4Q5T4D3 741 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 FIGLAQ6QHK4 219 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TMEM205Q6UW68 189 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 QSOX2Q6ZRP7 698 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MSANTD1Q6ZTZ1 278 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MOGAT3Q86VF5 341 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SFTPA2Q8IWL1 248 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 METTL4Q8N3J2 472 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 NATD1Q8N6N6 113 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 GBP7Q8N8V2 638 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ANKRD53Q8N9V6 530 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PLPP5Q8NEB5 264 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 GDAP1Q8TB36 358 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 UBLCP1Q8WVY7 318 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 IP6K3Q96PC2 410 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 TMEM237Q96Q45 408 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SORT1Q99523 831 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MYOCQ99972 504 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 NUDT22Q9BRQ3 303 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MEAF6Q9HAF1 191 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ZBTB26Q9HCK0 441 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PDE7BQ9NP56 450 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 LHX9Q9NQ69 397 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PLSCR4Q9NRQ2 329 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PRR13Q9NZ81 148 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 EHD3Q9NZN3 535 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 KIF17Q9P2E2 1029 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 XPR1Q9UBH6 696 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SH2B3Q9UQQ2 575 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 LOXL2Q9Y4K0 774 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 CLDN16Q9Y5I7 305 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 DCHS1Q96JQ0 3298 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MASP2O00187 686 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HAT1O14929 419 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PHGDHO43175 533 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HNRNPRO43390 633 aaKnown RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SHOX2O60902 331 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 CTSVO60911 334 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SDC3O75056 442 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 VPS4BO75351 444 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PSMG1O95456 288 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 SERPINE1P05121 402 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HIST1H2AGP0C0S8 130 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PIM1P11309 404 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ST6GAL1P15907 406 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HOXB9P17482 250 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HIST1H2ADP20671 130 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 ALDH3A1P30838 453 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 BCL6P41182 706 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MAP2K6P52564 334 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 CHAF1BQ13112 559 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 PRKAA1Q13131 559 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 BMPR2Q13873 1038 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 GTF2H2Q13888 395 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 HERC3Q15034 1050 aa3.3□□□□□ -1.88
CCDC66-202ENST00000341455 MUM1Q2TAK8 710 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms