RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 HNRNPFP52597 415 aaKnown RBP16.41■□□□□ 0.22
CLDN4-201ENST00000340958 AP2B1P63010 937 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 HBA1P69905 142 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 SPIDRQ14159 915 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 KCNAB1Q14722 419 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 RCN1Q15293 331 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 RSPO4Q2I0M5 234 aaPredicted RBP16.41■□□□□ 0.22
CLDN4-201ENST00000340958 INAVAQ3KP66 663 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 TCTE1Q5JU00 501 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 PERM1Q5SV97 790 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 CYP2R1Q6VVX0 501 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 OR2T12Q8NG77 320 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 CPPED1Q9BRF8 314 aaPredicted RBP16.41■□□□□ 0.22
CLDN4-201ENST00000340958 DCLRE1BQ9H816 532 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 TAS2R9Q9NYW1 312 aa16.41■□□□□ 0.22
CLDN4-201ENST00000340958 ATXN7L1Q9ULK2 861 aaPredicted RBP16.41■□□□□ 0.22
CLDN4-201ENST00000340958 FKBP6O75344 327 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 NTRK1P04629 796 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CTSBP07858 339 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 GPC1P35052 558 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 LIM2P55344 173 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CFHR1Q03591 330 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 HSPB3Q12988 150 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CYP51A1Q16850 503 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 PRSS53Q2L4Q9 553 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 SPDYE7PQ495Y7 208 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 STPG1Q5TH74 334 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 TTC29Q8NA56 475 aaPredicted RBP16.4■□□□□ 0.22
CLDN4-201ENST00000340958 IFI44Q8TCB0 444 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 PNPT1Q8TCS8 783 aaKnown RBP16.4■□□□□ 0.22
CLDN4-201ENST00000340958 NETO1Q8TDF5 533 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 UCN3Q969E3 161 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 SLC35C2Q9NQQ7 365 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CORO2BQ9UQ03 480 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 ZNF780BQ9Y6R6 833 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 TRBV5-3A0A0A0MS03 114 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 LY6G6EA0A0G2JKS1 128 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 HYKKA2RU49 373 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 SGK494L7N484 410 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 ACOT8O14734 319 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 PGRMC2O15173 223 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 PPIBP23284 216 aaKnown RBP16.4■□□□□ 0.22
CLDN4-201ENST00000340958 NCBP2P52298 156 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CCL7P80098 99 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 TNFRSF17Q02223 184 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 RUNX2Q13950 521 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 MAP7Q14244 749 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 MPEG1Q2M385 716 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 TMEM71Q6P5X7 295 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 PRSS41Q7RTY9 318 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CLEC4FQ8N1N0 589 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 ZFP28Q8NHY6 868 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 PYDC1Q8WXC3 89 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 OR5P2Q8WZ92 322 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 SLC35A5Q9BS91 424 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CHRNA10Q9GZZ6 450 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 MUC13Q9H3R2 512 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 IKZF5Q9H5V7 419 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 TPT1P8Q9HAU6 139 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 RNPEPL1Q9HAU8 725 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 FANCEQ9HB96 536 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 TMEM9BQ9NQ34 198 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 CDV3Q9UKY7 258 aaKnown RBP16.4■□□□□ 0.22
CLDN4-201ENST00000340958 DAPP1Q9UN19 280 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 U3KQA8 63 aa16.4■□□□□ 0.22
CLDN4-201ENST00000340958 MN1Q10571 1320 aaPredicted RBP16.4■□□□□ 0.22
CLDN4-201ENST00000340958 C4orf47A7E2U8 309 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 TMEM150CB9EJG8 249 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 GALR3O60755 368 aaPredicted RBP16.39■□□□□ 0.21
CLDN4-201ENST00000340958 CPNE6O95741 557 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 BAG2O95816 211 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 ZCCHC18P0CG32 403 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 CKMT1AP12532 417 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 PTPN6P29350 595 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 SNRPNP63162 240 aaKnown RBP16.39■□□□□ 0.21
CLDN4-201ENST00000340958 WLSQ5T9L3 541 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 SLC48A1Q6P1K1 146 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 PRSS42Q7Z5A4 293 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 KMT5CQ86Y97 462 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 OR9A4Q8NGU2 314 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 LRRN3Q9H3W5 708 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 KAT8Q9H7Z6 458 aaKnown RBP16.39■□□□□ 0.21
CLDN4-201ENST00000340958 LYRM4Q9HD34 91 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 NEUROD4Q9HD90 331 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 NEUROG3Q9Y4Z2 214 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 SNX13Q9Y5W8 968 aa16.39■□□□□ 0.21
CLDN4-201ENST00000340958 A0A0A6YYC8 382 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 I3L1I5 382 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 OR2B3O76000 313 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 NCK1P16333 377 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 HTR1EP28566 365 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 LIMK1P53667 647 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 MRPS22P82650 360 aaKnown RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GRM7Q14831 915 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 GPR19Q15760 415 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 PRTGQ2VWP7 1150 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 NIPAL1Q6NVV3 410 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF551Q7Z340 670 aaPredicted RBP16.38■□□□□ 0.21
CLDN4-201ENST00000340958 SZRD1Q7Z422 152 aa16.38■□□□□ 0.21
CLDN4-201ENST00000340958 PROSER1Q86XN7 944 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms