RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 MACROD1Q9BQ69 325 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 CXorf36Q9H7Y0 433 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TMEM98Q9Y2Y6 226 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 NOX1Q9Y5S8 564 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 SPIN1Q9Y657 262 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-201ENST00000340437 ENPP4Q9Y6X5 453 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 CENPXA8MT69 81 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 H0YIV9 168 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 M0R3H8 397 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 RNASET2O00584 256 aaKnown RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 PLD2O14939 933 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 TYRP14679 529 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 GPC1P35052 558 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 RAB25P57735 213 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 PRKCDQ05655 676 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 HNRNPA0Q13151 305 aaKnown RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 LY6G5CQ5SRR4 150 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 BRAT1Q6PJG6 821 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 OR5D16Q8NGK9 328 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 UCN3Q969E3 161 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CRELD1Q96HD1 420 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 TSSK6Q9BXA6 273 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CRNNQ9UBG3 495 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 COMMD3Q9UBI1 195 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 NUFIP1Q9UHK0 495 aaKnown RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 MKLN1Q9UL63 735 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 SLITRK5O94991 958 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CH25HO95992 272 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CYP17A1P05093 508 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 NPPBP16860 134 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 POLR2EP19388 210 aaKnown RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 GSTM5P46439 218 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CDC20Q12834 499 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CLEC12AQ5QGZ9 265 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 PDZK1Q5T2W1 519 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 AGAP6Q5VW22 663 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 FAM46DQ8NEK8 389 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 IL17RDQ8NFM7 739 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 GLYATL1Q969I3 302 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 TMEM19Q96HH6 336 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 AGAP4Q96P64 663 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 UCK2Q9BZX2 261 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 TMEM39AQ9NV64 488 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 PAQR5Q9NXK6 330 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 SEC14L3Q9UDX4 400 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 A0A1W2PQ09 198 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 GPR37L1O60883 481 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 FURINP09958 794 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 VIPR1P32241 457 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 HNRNPFP52597 415 aaKnown RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 ALDH6A1Q02252 535 aaKnown RBP13.72□□□□□ -0.21
CPSF7-201ENST00000340437 NFE2L1Q14494 772 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 DEFB115Q30KQ5 88 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 CDKL4Q5MAI5 379 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 OR2G6Q5TZ20 316 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 ZNF367Q7RTV3 350 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 RAB43Q86YS6 212 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 OXR1Q8N573 874 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 OR4C15Q8NGM1 316 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 BTN2A2Q8WVV5 523 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 COQ8BQ96D53 544 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 OPALINQ96PE5 141 aa13.72□□□□□ -0.21
CPSF7-201ENST00000340437 SLC35F4A4IF30 521 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 SLC16A5O15375 505 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 PUM1Q14671 1186 aaKnown RBP eCLIP13.71□□□□□ -0.21
CPSF7-201ENST00000340437 TUBA3EQ6PEY2 450 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 FAM20CQ8IXL6 584 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 GANCQ8TET4 914 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 TRMT2BQ96GJ1 504 aaKnown RBP13.71□□□□□ -0.21
CPSF7-201ENST00000340437 PHOX2BQ99453 314 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 BARHL1Q9BZE3 327 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 PLCXD1Q9NUJ7 323 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 IL20RAQ9UHF4 553 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 STOML2Q9UJZ1 356 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 SSR3Q9UNL2 185 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 IGLV3-16A0A075B6K0 115 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 TGM5O43548 720 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 CSO75390 466 aaKnown RBP13.71□□□□□ -0.21
CPSF7-201ENST00000340437 SLCO2B1O94956 709 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 C8AP07357 584 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 TIMP2P16035 220 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 S100A1P23297 94 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 XCR1P46094 333 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 MAP4K2Q12851 820 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 SLAMF1Q13291 335 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 RNF165Q6ZSG1 346 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 GLCCI1Q86VQ1 547 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 PGBD3Q8N328 593 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 KLHL6Q8WZ60 621 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 LYSMD1Q96S90 227 aa13.71□□□□□ -0.21
CPSF7-201ENST00000340437 FAM47E-STBD1D6RA91 191 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 FFAR1O14842 300 aa13.71□□□□□ -0.22
CPSF7-201ENST00000340437 NDUFB5O43674 189 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms