RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SERTM1A2A2V5 107 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 BLACEA4D250 179 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 ALPPP05187 535 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 UROSP10746 265 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 PPP2R1BP30154 601 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 TLX1P31314 330 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 BUD31P41223 144 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 SLC26A5P58743 744 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 ID2Q02363 134 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 EXT1Q16394 746 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 ARL13AQ5H913 290 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 C1orf52Q8N6N3 182 aaKnown RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 SIRT6Q8N6T7 355 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 CHTF18Q8WVB6 975 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 PSMF1Q92530 271 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 ANKRD9Q96BM1 317 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 ALOXE3Q9BYJ1 711 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 PNO1Q9NRX1 252 aaKnown RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 ARGLU1Q9NWB6 273 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 TEX10Q9NXF1 929 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-201ENST00000340074 C5AR2Q9P296 337 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 PTGFRNQ9P2B2 879 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 FIS1Q9Y3D6 152 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 SPTA1P02549 2419 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 SAGE2PA6NJ88 616 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 AZIN1O14977 448 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 MYO1DO94832 1006 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 AIFM1O95831 613 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 DHRS4L1P0CG22 281 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 MAPK12P53778 367 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 MAGOHP61326 146 aaKnown RBP14.27□□□□□ -0.12
UBE3B-201ENST00000340074 AP2B1P63010 937 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 STX4Q12846 297 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 COLEC12Q5KU26 742 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 ATG14Q6ZNE5 492 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 OR4N5Q8IXE1 308 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 OR6Y1Q8NGX8 325 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 M1APQ8TC57 530 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 UCN3Q969E3 161 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 TLCD1Q96CP7 247 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 APIPQ96GX9 242 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 EML4Q9HC35 981 aaKnown RBP14.27□□□□□ -0.12
UBE3B-201ENST00000340074 MMP25Q9NPA2 562 aa14.27□□□□□ -0.12
UBE3B-201ENST00000340074 GLOD5A6NK44 160 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 WASHC1A8K0Z3 465 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 B8ZZF3 427 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 BIRC5O15392 142 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 FGF17O60258 216 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 IFNA16P05015 189 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 NR2F6P10588 404 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 ARRB2P32121 409 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 CD97P48960 835 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 FOLH1Q04609 750 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 BTKQ06187 659 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 C19orf57Q0VDD7 668 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 KLRB1Q12918 225 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 IMPG1Q17R60 797 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 CRB2Q5IJ48 1285 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 KANK2Q63ZY3 851 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 B3GNTL1Q67FW5 361 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-201ENST00000340074 JMJD6Q6NYC1 403 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-201ENST00000340074 ISLR2Q6UXK2 745 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 LINC00696Q6ZRV3 163 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 TRIM46Q7Z4K8 759 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 ANKRD42Q8N9B4 389 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 TEX19Q8NA77 164 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 NFAM1Q8NET5 270 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-201ENST00000340074 AGR3Q8TD06 166 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 TANKQ92844 425 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 KCNK13Q9HB14 408 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 ADAP2Q9NPF8 381 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 VTI1BQ9UEU0 232 aa14.26□□□□□ -0.13
UBE3B-201ENST00000340074 PRRC2CQ9Y520 2896 aaKnown RBP14.26□□□□□ -0.13
UBE3B-201ENST00000340074 TMEM120BA0PK00 339 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 SYNDIG1LA6NDD5 238 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 A8MUI8 341 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 TMEM233B4DJY2 109 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 DPM1O60762 260 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 UQCRHP07919 91 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 FGF4P08620 206 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 SERPINB5P36952 375 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 RAE1P78406 368 aaKnown RBP14.25□□□□□ -0.13
UBE3B-201ENST00000340074 IGLV3-21P80748 117 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-201ENST00000340074 SERTAD2Q14140 314 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 TERF2Q15554 542 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 ELAVL1Q15717 326 aaKnown RBP14.25□□□□□ -0.13
UBE3B-201ENST00000340074 CHI3L2Q15782 390 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 NADK2Q4G0N4 442 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 SPIN4Q56A73 249 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 SPDYAQ5MJ70 313 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 SH2D4BQ5SQS7 431 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 NDUFAF5Q5TEU4 345 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 CES4AQ5XG92 561 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 IGFL2Q6UWQ7 119 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 IGFL3Q6UXB1 125 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 HDXQ7Z353 690 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 HPS6Q86YV9 775 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 KIF2BQ8N4N8 673 aa14.25□□□□□ -0.13
UBE3B-201ENST00000340074 RBMXL3Q8N7X1 1067 aaKnown RBP14.25□□□□□ -0.13
UBE3B-201ENST00000340074 PPP1R14CQ8TAE6 165 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms