RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 LIFP15018 202 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 EFNA3P52797 238 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 ARFIP2P53365 341 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 BTG2P78543 158 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 MC1RQ01726 317 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 FAM71E1Q6IPT2 247 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 UNQ6494/PRO21346Q6UXR6 183 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 VASH2Q86V25 355 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 ZNF595Q8IYB9 648 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 RILPQ96NA2 401 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 FAIM2Q9BWQ8 316 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 VN1R1Q9GZP7 353 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 EPN3Q9H201 632 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 WDR41Q9HAD4 459 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 HEY2Q9UBP5 337 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 PCDHA9Q9Y5H5 950 aa20.86■□□□□ 0.93
SDC3-202ENST00000339394 MRPS18BQ9Y676 258 aaKnown RBP20.86■□□□□ 0.93
SDC3-202ENST00000339394 C1orf226A1L170 272 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 CLDN4O14493 209 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 UBDO15205 165 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 PRMT3O60678 531 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 RECKO95980 971 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 RHAGQ02094 409 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 C2orf80Q0P641 193 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 IKBIPQ70UQ0 350 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 GFM2Q969S9 779 aaKnown RBP20.85■□□□□ 0.93
SDC3-202ENST00000339394 ELAC2Q9BQ52 826 aaKnown RBP20.85■□□□□ 0.93
SDC3-202ENST00000339394 DPH1Q9BZG8 443 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 NSRP1Q9H0G5 558 aaKnown RBP20.85■□□□□ 0.93
SDC3-202ENST00000339394 RABEP2Q9H5N1 569 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 C3orf18Q9UK00 162 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 EXO1Q9UQ84 846 aaKnown RBP20.85■□□□□ 0.93
SDC3-202ENST00000339394 BLACEA4D250 179 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 KLK10O43240 276 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 LRATO95237 230 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 UMODP07911 640 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 DRD2P14416 443 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 FOLR3P41439 243 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 ASMTP46597 345 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 ALDH9A1P49189 494 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 HSD17B7P56937 341 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 SRSF6Q13247 344 aaKnown RBP20.85■□□□□ 0.93
SDC3-202ENST00000339394 QSOX2Q6ZRP7 698 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 MTERF4Q7Z6M4 381 aaKnown RBP20.85■□□□□ 0.93
SDC3-202ENST00000339394 TANKQ92844 425 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 MARK4Q96L34 752 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 PTCHD1Q96NR3 888 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 CRB3Q9BUF7 120 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 PRTFDC1Q9NRG1 225 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 AIG1Q9NVV5 245 aa20.85■□□□□ 0.93
SDC3-202ENST00000339394 G3BP2Q9UN86 482 aaKnown RBP20.85■□□□□ 0.93
SDC3-202ENST00000339394 CTNSO60931 367 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 LDB3O75112 727 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 HEXBP07686 556 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 DDCP20711 480 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 MAOAP21397 527 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 EMP2P54851 167 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 SLC13A2Q13183 592 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 SLC48A1Q6P1K1 146 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 SPATA21Q7Z572 469 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 SCUBE1Q8IWY4 988 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 DNAJB14Q8TBM8 379 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 EFHD1Q9BUP0 239 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 PRDM9Q9NQV7 894 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 C5AR2Q9P296 337 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 CES1P1Q9UKY3 287 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 MMACHCQ9Y4U1 282 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 GPR45Q9Y5Y3 372 aa20.84■□□□□ 0.93
SDC3-202ENST00000339394 SRRM3A6NNA2 597 aaPredicted RBP20.83■□□□□ 0.92
SDC3-202ENST00000339394 AKAP10O43572 662 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 FGF17O60258 216 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 IDO1P14902 403 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 EIF2S3P41091 472 aaKnown RBP20.83■□□□□ 0.92
SDC3-202ENST00000339394 OR52E8Q6IFG1 317 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 OR4N5Q8IXE1 308 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 PLPP5Q8NEB5 264 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 C10orf82Q8WW14 230 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 ANKRD9Q96BM1 317 aaPredicted RBP20.83■□□□□ 0.92
SDC3-202ENST00000339394 BRINP2Q9C0B6 783 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 CLDN16Q9Y5I7 305 aa20.83■□□□□ 0.92
SDC3-202ENST00000339394 SNX3O60493 162 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 PRPS1L1P21108 318 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 CLDN8P56748 225 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 FOLH1Q04609 750 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 SSPNQ14714 243 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 NSDHLQ15738 373 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 GSTA3Q16772 222 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 KRTCAP2Q8N6L1 136 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 TSLPQ969D9 159 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 CATSPER2Q96P56 530 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 MIEF1Q9NQG6 463 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 NECTIN3Q9NQS3 549 aa20.82■□□□□ 0.92
SDC3-202ENST00000339394 TGFBR3LH3BV60 316 aa20.81■□□□□ 0.92
SDC3-202ENST00000339394 ANKRD28O15084 1053 aa20.81■□□□□ 0.92
SDC3-202ENST00000339394 ALOX12BO75342 701 aa20.81■□□□□ 0.92
SDC3-202ENST00000339394 CREG1O75629 220 aa20.81■□□□□ 0.92
SDC3-202ENST00000339394 FURINP09958 794 aa20.81■□□□□ 0.92
SDC3-202ENST00000339394 NME5P56597 212 aa20.81■□□□□ 0.92
SDC3-202ENST00000339394 ID2Q02363 134 aa20.81■□□□□ 0.92
SDC3-202ENST00000339394 RPS6KA2Q15349 733 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms