RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 H0Y8G0 127 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 BHLHE40O14503 412 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 LRRTM2O43300 516 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NUDT21O43809 227 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SGPL1O95470 568 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CSH1P0DML2 217 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CSH2P0DML3 217 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NDUFB7P17568 137 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 BMP8BP34820 402 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 DPY19L1Q2PZI1 675 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 C3orf38Q5JPI3 329 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CES4AQ5XG92 561 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GJB7Q6PEY0 223 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 DEF8Q6ZN54 512 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ABHD13Q7L211 337 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF720Q7Z2F6 126 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 BMP8AQ7Z5Y6 402 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MON1AQ86VX9 555 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR6V1Q8N148 313 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MYCT1Q8N699 235 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SAMD12Q8N8I0 201 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 REPS2Q8NFH8 660 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GPRC5AQ8NFJ5 357 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR56A3Q8NH54 315 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR56B4Q8NH76 319 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR5R1Q8NH85 324 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 XAGE5Q8WWM1 108 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 THRSPQ92748 146 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GJA10Q969M2 543 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CERS2Q96G23 380 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MEGF10Q96KG7 1140 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RPL10LQ96L21 214 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PCGF1Q9BSM1 259 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NDUFAF3Q9BU61 184 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CDCA4Q9BXL8 241 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CPEB1Q9BZB8 566 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ELOVL2Q9NXB9 296 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TCFL5Q9UL49 500 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NDUFB9Q9Y6M9 179 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 A0A0J9YYE9 177 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MINDY4BA8MYZ0 360 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 EEDO75530 441 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 STAG3L1P0CL83 205 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MAN2A2P49641 1150 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 POU4F2Q12837 409 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 IL18Q14116 193 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ACER2Q5QJU3 275 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 UBXN11Q5T124 520 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TANGO2Q6ICL3 276 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF529Q6P280 563 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 KCTD6Q8NC69 237 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CCNYQ8ND76 341 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 BBS1Q8NFJ9 593 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR10R2Q8NGX6 335 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR4C6Q8NH72 309 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TRMT10AQ8TBZ6 339 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 BRI3BPQ8WY22 251 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 AKT1S1Q96B36 256 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 HBEGFQ99075 208 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PCYT2Q99447 389 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 FICDQ9BVA6 458 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SEC11CQ9BY50 192 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MIR1-1HGQ9H1L0 117 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RHBGQ9H310 441 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ZBTB20Q9HC78 741 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ZIM2Q9NZV7 527 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 A0A0G2JLW4 131 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GSG1L2A8MUP6 293 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ARNTLO00327 626 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MAN2B1O00754 1011 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LATS1O95835 1130 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SNRPA1P09661 255 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 DNAJA1P31689 397 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CASP6P55212 293 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MBTPS1Q14703 1052 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NTRK2Q16620 822 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NKPD1Q17RQ9 610 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 FAM83EQ2M2I3 478 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GLYR1Q49A26 553 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 DACT2Q5SW24 774 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NOL9Q5SY16 702 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TAPT1Q6NXT6 567 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 DEGS2Q6QHC5 323 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 IL20RBQ6UXL0 311 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 DLEU7Q6UYE1 221 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZPBP2Q6X784 338 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 USP30Q70CQ3 517 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LDB1Q86U70 411 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SLC47A2Q86VL8 602 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM200AQ86VY9 491 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TOMM5Q8N4H5 51 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 OR14A16Q8NHC5 309 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 STYXQ8WUJ0 223 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MRPS31Q92665 395 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ELMOD3Q96FG2 381 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 C14orf144Q96I85 54 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MBOAT4Q96T53 435 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SEMA4CQ9C0C4 833 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NLGN3Q9NZ94 848 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF70Q9UC06 446 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms