RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CHIT1Q13231 466 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 MSANTD1Q6ZTZ1 278 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 GALNT6Q8NCL4 622 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 C9orf43Q8TAL5 461 aaPredicted RBP17.92■□□□□ 0.46
PSPC1-201ENST00000338910 NELL1Q92832 810 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 TPD52L3Q96J77 140 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 VPS35Q96QK1 796 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 LMAN2LQ9H0V9 348 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 NFKBIL1Q9UBC1 381 aaPredicted RBP17.92■□□□□ 0.46
PSPC1-201ENST00000338910 KCNE1BA0A087WTH5 132 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 ADRA2AP08913 450 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 DOC2BQ14184 412 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 SSX1Q16384 188 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 HNRNPA1L2Q32P51 320 aaKnown RBP17.92■□□□□ 0.46
PSPC1-201ENST00000338910 VITQ6UXI7 678 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 C11orf74Q86VG3 221 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 GPR151Q8TDV0 419 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 CCM2Q9BSQ5 444 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 CDCA4Q9BXL8 241 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 BARHL1Q9BZE3 327 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 SRRQ9GZT4 340 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 MMP28Q9H239 520 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 TRIM39Q9HCM9 518 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 NUFIP1Q9UHK0 495 aaKnown RBP17.92■□□□□ 0.46
PSPC1-201ENST00000338910 CFAP20Q9Y6A4 193 aaKnown RBP17.92■□□□□ 0.46
PSPC1-201ENST00000338910 A0A1W2PQ09 198 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 RGS5O15539 181 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 MMP20O60882 483 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 KIR3DL1P43629 444 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 HYAL2Q12891 473 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 ZNF234Q14588 700 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 DUOXA1Q1HG43 343 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 TSEN54Q7Z6J9 526 aaKnown RBP17.91■□□□□ 0.46
PSPC1-201ENST00000338910 FAM9CQ8IZT9 166 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 SLC5A8Q8N695 610 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 B3GNT7Q8NFL0 401 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 OR8D1Q8WZ84 308 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 DTD2Q96FN9 168 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 MED8Q96G25 268 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 COQ10AQ96MF6 247 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 TAPBPLQ9BX59 468 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 GON7Q9BXV9 100 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 MSRAQ9UJ68 235 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 KLHL20Q9Y2M5 609 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.91■□□□□ 0.46
PSPC1-201ENST00000338910 LOC105371267A0A1B0GV96 52 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.91■□□□□ 0.46
PSPC1-201ENST00000338910 TBC1D3BA6NDS4 549 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 FPGTO14772 594 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 EPN2O95208 641 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 GSTM1P09488 218 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 BDKRB1P46663 353 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 PRLHRP49683 370 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 MTAPQ13126 283 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 VEZF1Q14119 521 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 MED22Q15528 200 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 SYCE2Q6PIF2 218 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 TMPRSS11AQ6ZMR5 421 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 DEPDC4Q8N2C3 294 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 L3MBTL4Q8NA19 623 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 PANX1Q96RD7 426 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 FAM129BQ96TA1 746 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 ROGDIQ9GZN7 287 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 RUBCNLQ9H714 662 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 DZANK1Q9NVP4 752 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 MS4A12Q9NXJ0 267 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 VPS4AQ9UN37 437 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 PADI2Q9Y2J8 665 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 DOCK8Q8NF50 2099 aa17.91■□□□□ 0.46
PSPC1-201ENST00000338910 A0A0X1KG70 313 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 EDDM13A0A1B0GTR0 161 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 SLC35F4A4IF30 521 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 EFCAB10A6NFE3 127 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 QSOX1O00391 747 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 PSIP1O75475 530 aaKnown RBP17.9■□□□□ 0.46
PSPC1-201ENST00000338910 AZGP1P25311 298 aaKnown RBP17.9■□□□□ 0.46
PSPC1-201ENST00000338910 RPS19P39019 145 aaKnown RBP17.9■□□□□ 0.46
PSPC1-201ENST00000338910 IRF8Q02556 426 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 NAE1Q13564 534 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 GGTA1PQ4G0N0 100 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 WDR45BQ5MNZ6 344 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 NRSN1Q8IZ57 195 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 CHTF18Q8WVB6 975 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 APIPQ96GX9 242 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 CDCA3Q99618 268 aaPredicted RBP17.9■□□□□ 0.46
PSPC1-201ENST00000338910 OR2AG1Q9H205 316 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 TRPV4Q9HBA0 871 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 RLIMQ9NVW2 624 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 PLXNA2O75051 1894 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 SLC5A10A0PJK1 596 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 TMEM229AB2RXF0 380 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 SOD1P00441 154 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 ENDOUP21128 410 aaKnown RBP17.9■□□□□ 0.46
PSPC1-201ENST00000338910 ITGB7P26010 798 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 HTR2BP41595 481 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 FRG2Q64ET8 278 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 THOC6Q86W42 341 aaKnown RBP17.9■□□□□ 0.46
PSPC1-201ENST00000338910 LAX1Q8IWV1 398 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 SYNPOQ8N3V7 929 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 TTC9Q92623 222 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms