RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CEP68Q76N32 757 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 WDR53Q7Z5U6 358 aaPredicted RBP6.21□□□□□ -1.42
HMG20A-201ENST00000336216 NPAS3Q8IXF0 933 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 LILRB4Q8NHJ6 448 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 RLN3Q8WXF3 142 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 NEIL2Q969S2 332 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 ZSWIM3Q96MP5 696 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 POLR2J3Q9H1A7 115 aaKnown RBP6.21□□□□□ -1.42
HMG20A-201ENST00000336216 MMP27Q9H306 513 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 NECTIN3Q9NQS3 549 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 PTGFRNQ9P2B2 879 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 LHX3Q9UBR4 397 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 OARD1Q9Y530 152 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 PCDHGB6Q9Y5F9 930 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 GPR179Q6PRD1 2367 aa6.21□□□□□ -1.42
HMG20A-201ENST00000336216 EDDM13A0A1B0GTR0 161 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 FAM240BA0A1B0GVZ2 78 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 GTPBP1O00178 669 aaKnown RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CPNE6O95741 557 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PRLP01236 227 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 FGF4P08620 206 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PSKH1P11801 424 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF10P21506 573 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PPIBP23284 216 aaKnown RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PSMB5P28074 263 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 RPL3P39023 403 aaKnown RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 HTR2BP41595 481 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CASP3P42574 277 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 SLC35F1Q5T1Q4 408 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 KHDRBS2Q5VWX1 349 aaKnown RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 KIAA1614Q5VZ46 1190 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CYHR1Q6ZMK1 362 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 NRARPQ7Z6K4 114 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 LYSMD2Q8IV50 215 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CNTN4Q8IWV2 1026 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PARP16Q8N5Y8 322 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 FBXO15Q8NCQ5 510 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 OR7G3Q8NG95 312 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF675Q8TD23 568 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 OVCA2Q8WZ82 227 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 TADA1Q96BN2 335 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ZBED6CLQ96FA7 236 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 TPSD1Q9BZJ3 242 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 TBC1D17Q9HA65 648 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PLSCR3Q9NRY6 295 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CRNNQ9UBG3 495 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 HSPB11Q9Y547 144 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 COLEC10Q9Y6Z7 277 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 BDP1A6H8Y1 2624 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 FAM92AA1XBS5 289 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CARNS1A5YM72 827 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 TMEM202A6NGA9 273 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ARHGEF33A8MVX0 844 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 F11P03951 625 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CMPK1P30085 196 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 DNAJA1P31689 397 aaKnown RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 KDELR2P33947 212 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 LIPAP38571 399 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ISL1P61371 349 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF234Q14588 700 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CTF1Q16619 201 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 TIMM50Q3ZCQ8 353 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 KIAA1161Q6NSJ0 714 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 LRRC70Q7Z2Q7 622 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 TIGD4Q8IY51 512 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 OR2A12Q8NGT7 310 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 OR8K5Q8NH50 307 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PCNPQ8WW12 178 aaKnown RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 IPCEF1Q8WWN9 437 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 SMPDL3AQ92484 453 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 SMARCD2Q92925 531 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF514Q96K75 400 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 SLC30A2Q9BRI3 323 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 DPH7Q9BTV6 452 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 SLC6A17Q9H1V8 727 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ACOT13Q9NPJ3 140 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF222Q9UK12 451 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 SPATA2Q9UM82 520 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 AP3M1Q9Y2T2 418 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 IRAK3Q9Y616 596 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PLXNB2O15031 1838 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 TCRBV5S2A0A599 114 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 AGAP5A6NIR3 686 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 WASH4PA8MWX3 477 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 SSX4O60224 188 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 KLF8O95600 359 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 AK4P27144 223 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 HK3P52790 923 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ABHD18Q0P651 414 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 GALNT1Q10472 559 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 NPRL3Q12980 569 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 RUNX3Q13761 415 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ZNHIT3Q15649 155 aaPredicted RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 LRIT3Q3SXY7 679 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PRRT3Q5FWE3 981 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CRB2Q5IJ48 1285 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 ERICH5Q6P6B1 374 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 PARS2Q7L3T8 475 aaKnown RBP6.2□□□□□ -1.42
HMG20A-201ENST00000336216 NAGSQ8N159 534 aa6.2□□□□□ -1.42
HMG20A-201ENST00000336216 CYP4Z2PQ8N1L4 340 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms