RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 MRPS23Q9Y3D9 190 aaKnown RBP22.26■■□□□ 1.15
NDEL1-201ENST00000334527 PCDHGA3Q9Y5H0 932 aa22.26■■□□□ 1.15
NDEL1-201ENST00000334527 MYO7AQ13402 2215 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 TRBV4-1A0A0J9YWV2 114 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 AGAP5A6NIR3 686 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 CNR2P34972 360 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 OLR1P78380 273 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ELAVL3Q14576 367 aaKnown RBP22.25■■□□□ 1.15
NDEL1-201ENST00000334527 FRMPD2BQ6IN97 320 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ZNF770Q6IQ21 691 aaPredicted RBP22.25■■□□□ 1.15
NDEL1-201ENST00000334527 DSG4Q86SJ6 1040 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 TRIM73Q86UV7 250 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 APOBEC4Q8WW27 367 aaKnown RBP22.25■■□□□ 1.15
NDEL1-201ENST00000334527 TM4SF18Q96CE8 201 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ITPKCQ96DU7 683 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 PPP1R16AQ96I34 528 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 CENPOQ9BU64 300 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ROGDIQ9GZN7 287 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 A4GALTQ9NPC4 353 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 DYRK4Q9NR20 520 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ABCB10Q9NRK6 738 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 CUEDC1Q9NWM3 386 aaPredicted RBP22.25■■□□□ 1.15
NDEL1-201ENST00000334527 CCDC88CQ9P219 2028 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 EFCAB10A6NFE3 127 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 PDPK1O15530 556 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 SH3BP5O60239 455 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 UPK1BO75841 260 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 VIPR2P41587 438 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 SFSWAPQ12872 951 aaKnown RBP22.25■■□□□ 1.15
NDEL1-201ENST00000334527 HSPB3Q12988 150 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 AGAP7PQ5VUJ5 663 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ZNF367Q7RTV3 350 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 AMZ2Q86W34 360 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ETFBKMTQ8IXQ9 262 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 TMEM19Q96HH6 336 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 ZFYVE19Q96K21 471 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 RHBGQ9H310 441 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 CLN6Q9NWW5 311 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 C5AR2Q9P296 337 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 SLC23A2Q9UGH3 650 aa22.25■■□□□ 1.15
NDEL1-201ENST00000334527 SH3D21A4FU49 640 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 MPZL2O60487 215 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 HNRNPA1P09651 372 aaKnown RBP eCLIP22.24■■□□□ 1.15
NDEL1-201ENST00000334527 C9orf43Q8TAL5 461 aaPredicted RBP22.24■■□□□ 1.15
NDEL1-201ENST00000334527 RAB8BQ92930 207 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 AIF1LQ9BQI0 150 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 CDADC1Q9BWV3 514 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 MS4A8Q9BY19 250 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 A3GALT2U3KPV4 340 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 FEZF1A0PJY2 475 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 TAF4O00268 1085 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 ZW10O43264 779 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 SEMA3DO95025 777 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 RB1P06400 928 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 ADRA2AP08913 450 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 BSGP35613 385 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 LEXMQ3ZCV2 418 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 TMEM52BQ4KMG9 183 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 TUBA3EQ6PEY2 450 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 ERN2Q76MJ5 926 aaKnown RBP22.24■■□□□ 1.15
NDEL1-201ENST00000334527 SFTPA1Q8IWL2 248 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 GPR32P1Q8NGA4 272 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 CXorf40AQ8TE69 158 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 OR5M11Q96RB7 305 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 CDCA4Q9BXL8 241 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 CNOT2Q9NZN8 540 aaKnown RBP22.24■■□□□ 1.15
NDEL1-201ENST00000334527 CCDC59Q9P031 241 aaKnown RBP22.24■■□□□ 1.15
NDEL1-201ENST00000334527 ZNF229Q9UJW7 825 aa22.24■■□□□ 1.15
NDEL1-201ENST00000334527 PAIP2BQ9ULR5 123 aaKnown RBP22.24■■□□□ 1.15
NDEL1-201ENST00000334527 BMPR1AP36894 532 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 HEPACAMQ14CZ8 416 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 MED22Q15528 200 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 SPDYE7PQ495Y7 208 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 SPPL3Q8TCT6 385 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 PAWRQ96IZ0 340 aaKnown RBP22.23■■□□□ 1.15
NDEL1-201ENST00000334527 NXF2Q9GZY0 626 aaKnown RBP22.23■■□□□ 1.15
NDEL1-201ENST00000334527 PELI2Q9HAT8 420 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 C11orf16Q9NQ32 467 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 TMCC3Q9ULS5 477 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 KIAA0355O15063 1070 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 CAPN5O15484 640 aaPredicted RBP22.23■■□□□ 1.15
NDEL1-201ENST00000334527 MFN2O95140 757 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 PSMB5P28074 263 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 RPA4Q13156 261 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 TPRG1LQ5T0D9 272 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 C6orf120Q7Z4R8 191 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 LYSMD2Q8IV50 215 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 MMAAQ8IVH4 418 aaKnown RBP22.23■■□□□ 1.15
NDEL1-201ENST00000334527 FAM46DQ8NEK8 389 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 Q96MT0 163 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 RSPO3Q9BXY4 272 aaPredicted RBP22.23■■□□□ 1.15
NDEL1-201ENST00000334527 NEUROD4Q9HD90 331 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 IL23AQ9NPF7 189 aa22.23■■□□□ 1.15
NDEL1-201ENST00000334527 SCHIP1Q9P0W5 487 aaPredicted RBP22.23■■□□□ 1.15
NDEL1-201ENST00000334527 EIF2B2P49770 351 aaKnown RBP22.22■■□□□ 1.15
NDEL1-201ENST00000334527 LACC1Q8IV20 430 aa22.22■■□□□ 1.15
NDEL1-201ENST00000334527 EXOSC8Q96B26 276 aaKnown RBP22.22■■□□□ 1.15
NDEL1-201ENST00000334527 INIPQ9NRY2 104 aa22.22■■□□□ 1.15
NDEL1-201ENST00000334527 TM7SF3Q9NS93 570 aa22.22■■□□□ 1.15
NDEL1-201ENST00000334527 KLK4Q9Y5K2 254 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms