RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 KCTD21Q4G0X4 260 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 LETMD1Q6P1Q0 360 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CARM1Q86X55 608 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CD320Q9NPF0 282 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CPNE7Q9UBL6 633 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 ACSL6Q9UKU0 697 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 PAIP2BQ9ULR5 123 aaKnown RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 NENFQ9UMX5 172 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 PLCL2Q9UPR0 1127 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 UBE2QL1A1L167 161 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 G3V2L1 256 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 TRMUO75648 421 aaKnown RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CTGFP29279 349 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 GRIK2Q13002 908 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CTC1Q2NKJ3 1217 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 ADAMTS18Q8TE60 1221 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 C16orf78Q8WTQ4 265 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 KHSRPQ92945 711 aaKnown RBP eCLIP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 NEIL2Q969S2 332 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 APIPQ96GX9 242 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 PKP2Q99959 881 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 TPD52L2O43399 206 aaKnown RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 NUAK1O60285 661 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 CDKN3Q16667 212 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 LIN54Q6MZP7 749 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 SLC25A24Q6NUK1 477 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 FIGNL1Q6PIW4 674 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 COQ8BQ96D53 544 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 RBP7Q96R05 134 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 BHLHE41Q9C0J9 482 aaPredicted RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 CLEC4MQ9H2X3 399 aaPredicted RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 UBE2ZQ9H832 354 aaPredicted RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 SLC35C2Q9NQQ7 365 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 C5AR2Q9P296 337 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 WBP11Q9Y2W2 641 aaKnown RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 HCN4Q9Y3Q4 1203 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 EFCAB9A8MZ26 197 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 IFNA6P05013 189 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 F3P13726 295 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 S100GP29377 79 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 RNASE12Q5GAN4 147 aaKnown RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 KANK2Q63ZY3 851 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 PGBD5Q8N414 524 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 S100ZQ8WXG8 99 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 UFD1Q92890 307 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 CXorf21Q9HAI6 301 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TCF7L1Q9HCS4 588 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 B3GAT2Q9NPZ5 323 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 OR6C2Q9NZP2 312 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 THAP10Q9P2Z0 257 aaPredicted RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 A0A0J9YY10 115 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 ANXA2P2A6NMY6 339 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 LOC110117498-PIK3R3F6TDL0 507 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 PRLP01236 227 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 ANXA2P07355 339 aaKnown RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 GBX2P52951 348 aaPredicted RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 PTPRRQ15256 657 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 BLOC1S3Q6QNY0 202 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 GPAT4Q86UL3 456 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 C11orf24Q96F05 449 aaPredicted RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TIMM29Q9BSF4 260 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 DUSP23Q9BVJ7 150 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 NLGN3Q9NZ94 848 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 PPP4R1LQ9P1A2 415 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TNFRSF10DQ9UBN6 386 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TMEM5Q9Y2B1 443 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 H3BNX3 289 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TLX2O43763 284 aaPredicted RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 LAMP1P11279 417 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 KDELR2P33947 212 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 PDX1P52945 283 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TAS2R38P59533 333 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 RASGEF1BQ0VAM2 473 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 SPATS1Q496A3 300 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TMEM225Q6GV28 225 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 FAM180BQ6P0A1 224 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 ERMP1Q7Z2K6 904 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 NR4A3Q92570 626 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 PNPLA2Q96AD5 504 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 ADAD1Q96M93 576 aaKnown RBP14.35□□□□□ -0.11
C9orf47-201ENST00000334490 GAL3ST1Q99999 423 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 MAPKAP1Q9BPZ7 522 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 TM9SF3Q9HD45 589 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 LRIT1Q9P2V4 623 aa14.35□□□□□ -0.11
C9orf47-201ENST00000334490 USP54Q70EL1 1684 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 SLC9B1P1A6NJY1 282 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 SCAMP2O15127 329 aaKnown RBP14.34□□□□□ -0.11
C9orf47-201ENST00000334490 TACSTD2P09758 323 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 PRLHRP49683 370 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 NUDT6P53370 316 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 MC1RQ01726 317 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 FCHO2Q0JRZ9 810 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 MADCAM1Q13477 382 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 LCTLQ6UWM7 567 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 CLECL1Q8IZS7 167 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 BCL7CQ8WUZ0 217 aaPredicted RBP14.34□□□□□ -0.11
C9orf47-201ENST00000334490 NAT6Q93015 286 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 CMKLR1Q99788 373 aa14.34□□□□□ -0.11
C9orf47-201ENST00000334490 PHF7Q9BWX1 381 aaPredicted RBP14.34□□□□□ -0.11
C9orf47-201ENST00000334490 HYKKA2RU49 373 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms