RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 SLC7A11Q9UPY5 501 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 OR7A17O14581 309 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 GPR137BO60478 399 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ECI2O75521 394 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 POU2F1P14859 743 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TCEA1P23193 301 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NMBRP28336 390 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SLC6A9P48067 706 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 IRF5Q13568 498 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RBMS2Q15434 407 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PPM1JQ5JR12 505 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CCNJQ5T5M9 372 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 BCL2L15Q5TBC7 163 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 LIPKQ5VXJ0 399 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 AWAT2Q6E213 333 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ZFAND4Q86XD8 727 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 C2CD4AQ8NCU7 369 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 OR7G3Q8NG95 312 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 OR2T11Q8NH01 316 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SORCS1Q8WY21 1168 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 MGLLQ99685 303 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SAMD10Q9BYL1 202 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TSPAN10Q9H1Z9 355 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RHBGQ9H310 441 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 B3GNT2Q9NY97 397 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NFYAP23511 347 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ADRA1BP35368 520 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TAS2R46P59540 309 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 MRPL49Q13405 166 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SPHARQ15513 63 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RNASE10Q5GAN6 216 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 XKR5Q6UX68 686 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CD163Q86VB7 1156 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 FAM163AQ96GL9 167 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SPATC1LQ9H0A9 340 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 OR51J1Q9H342 316 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SLC28A3Q9HAS3 691 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ACSL6Q9UKU0 697 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 INTS6Q9UL03 887 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 A0A1W2PS29 197 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PRKCGP05129 697 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ITGA5P08648 1049 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PIM1P11309 404 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 FOXN2P32314 431 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PPT1P50897 306 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 KCNJ8Q15842 424 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PRSS55Q6UWB4 352 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SLC15A4Q8N697 577 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NPLOC4Q8TAT6 608 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PROKR1Q8TCW9 393 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 GPR151Q8TDV0 419 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TXNDC15Q96J42 360 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 C12orf10Q9HB07 376 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 FAM212BQ9NTI7 297 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PCDHGA5Q9Y5G8 931 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 MRC1P22897 1456 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SPATA31A1Q5TZJ5 1347 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 WASH4PA8MWX3 477 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 VILLO15195 856 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 FAM155BO75949 473 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HBE1P02100 147 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 LGALS2P05162 132 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ADRB3P13945 408 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PLA2G16P53816 162 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 WDR4P57081 412 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RAB11BQ15907 218 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 DUSP7Q16829 419 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM173Q86WV6 379 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 POGLUT1Q8NBL1 392 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RSPRY1Q96DX4 576 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ELMOD3Q96FG2 381 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 BORCS8Q96FH0 119 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HSD17B14Q9BPX1 270 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ACBD6Q9BR61 282 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SMCO4Q9NRQ5 59 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RXFP3Q9NSD7 469 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 BTBD17A6NE02 478 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 IRF6O14896 467 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ADH1AP07327 375 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TSPAN8P19075 237 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CA5AP35218 305 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 FNTBP49356 437 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 GPR139Q6DWJ6 353 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 WDR88Q6ZMY6 472 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PYROXD2Q8N2H3 581 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OR2AP1Q8NGE2 309 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OR13C3Q8NGS6 347 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF417Q8TAU3 575 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 HDHD5Q9BXW7 423 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 NLE1Q9NVX2 485 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 XRN1Q8IZH2 1706 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 C1orf167Q5SNV9 1468 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CPSF4LA6NMK7 179 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 VSTM5A8MXK1 200 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CDC7O00311 574 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM127O75204 238 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RGS11O94810 467 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ENDOD1O94919 500 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SFTPBP07988 381 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 EVI2BP34910 448 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms