RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 GALNT15Q8N3T1 639 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 TMEM132CQ8N3T6 1108 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 MR1Q95460 341 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 DDA1Q9BW61 102 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 TMEM121BQ9BXQ6 578 aaPredicted RBP15.55■□□□□ 0.08
SHOX-201ENST00000334060 WDR70Q9NW82 654 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 NMRK1Q9NWW6 199 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 ASIC5Q9NY37 505 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 AHSPQ9NZD4 102 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 CES1P1Q9UKY3 287 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 EIF3LQ9Y262 564 aaKnown RBP15.55■□□□□ 0.08
SHOX-201ENST00000334060 ANP32DO95626 131 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 FURINP09958 794 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 SOX18P35713 384 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 AVPR1BP47901 424 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 ARSFP54793 590 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 TNFRSF17Q02223 184 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 KLF10Q13118 480 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 EIF3IQ13347 325 aaKnown RBP15.54■□□□□ 0.08
SHOX-201ENST00000334060 OR4F3Q6IEY1 312 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 ZNF517Q6ZMY9 492 aaPredicted RBP15.54■□□□□ 0.08
SHOX-201ENST00000334060 CLEC4FQ8N1N0 589 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 SRFBP1Q8NEF9 429 aaKnown RBP15.54■□□□□ 0.08
SHOX-201ENST00000334060 TRIM8Q9BZR9 551 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 MYNNQ9NPC7 610 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 NECTIN3Q9NQS3 549 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 SLC6A13Q9NSD5 602 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 ADAM29Q9UKF5 820 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 SRPK3Q9UPE1 567 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 TMED5Q9Y3A6 229 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 PCDHGA8Q9Y5G5 932 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 PCDHGA3Q9Y5H0 932 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 ZZEF1O43149 2961 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 IGF2RP11717 2491 aa15.54■□□□□ 0.08
SHOX-201ENST00000334060 LOC100653049A0A140TA62 436 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 TMX2-CTNND1H3BSU7 103 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 SMNDC1O75940 238 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHOX-201ENST00000334060 KRT34O76011 436 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 BMP10O95393 424 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 PIK3R1P27986 724 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 CPA2P48052 419 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 EMP3P54852 163 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 WNT3P56703 355 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 RAB38P57729 211 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 RAB15P59190 212 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 DCDP81605 110 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 BLMHQ13867 455 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 FAM174BQ3ZCQ3 159 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 VPS26BQ4G0F5 336 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 TIGD2Q4W5G0 525 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 LANCL3Q6ZV70 420 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 PAGE2Q7Z2X7 111 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 CLECL1Q8IZS7 167 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 FBXO27Q8NI29 283 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 STT3BQ8TCJ2 826 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 ANKRD9Q96BM1 317 aaPredicted RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 CNRIP1Q96F85 164 aaPredicted RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 NAF1Q96HR8 494 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 SPSB2Q99619 263 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 SLAMF8Q9P0V8 285 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 MAP4K5Q9Y4K4 846 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 CHD8Q9HCK8 2581 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 CROCCQ5TZA2 2017 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 IGHV3-20A0A0C4DH32 117 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 LOC101059948A0A1B0GTJ6 334 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 H0YIG0 161 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 NR5A2O00482 541 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 SCAMP2O15127 329 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 ERAL1O75616 437 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 MYO1DO94832 1006 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 NR2F6P10588 404 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 IDO1P14902 403 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 FEN1P39748 380 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 CLDN8P56748 225 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 FOLH1Q04609 750 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 LTB4RQ15722 352 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 NKG7Q16617 165 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 PGS1Q32NB8 556 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 MINDY4Q4G0A6 757 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 PDCD4Q53EL6 469 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 RETREG3Q86VR2 466 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 DNAJB14Q8TBM8 379 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 CT55Q8WUE5 264 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 PPWD1Q96BP3 646 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 DPY30Q9C005 99 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 CLMPQ9H6B4 373 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 RPF2Q9H7B2 306 aaKnown RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 ARL8BQ9NVJ2 186 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 IFT80Q9P2H3 777 aaPredicted RBP15.53■□□□□ 0.08
SHOX-201ENST00000334060 PCDHA9Q9Y5H5 950 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 AK5Q9Y6K8 562 aa15.53■□□□□ 0.08
SHOX-201ENST00000334060 PSMD12O00232 456 aaPredicted RBP15.52■□□□□ 0.07
SHOX-201ENST00000334060 CBX6O95503 412 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 RECKO95980 971 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 FHP07954 510 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 TGM3Q08188 693 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 MFSD4BQ5TF39 518 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 MRPL14Q6P1L8 145 aaKnown RBP15.52■□□□□ 0.07
SHOX-201ENST00000334060 TRPM8Q7Z2W7 1104 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms