RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CLDN4O14493 209 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 PGRMC2O15173 223 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 LDB3O75112 727 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 NR2F6P10588 404 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 HSD17B7P56937 341 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 TAS2R50P59544 299 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 SLC13A2Q13183 592 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 C6orf136Q5SQH8 315 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 VWA5B1Q5TIE3 1220 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 MAVSQ7Z434 540 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 C16orf78Q8WTQ4 265 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 METTL21AQ8WXB1 218 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 NACC2Q96BF6 587 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 FCRL1Q96LA6 429 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 AKTIPQ9H8T0 292 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 PFDN4Q9NQP4 134 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 RIC8BQ9NVN3 520 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 P4HTMQ9NXG6 502 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 IGKV3D-11A0A0A0MRZ8 115 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 TCP11X1B4DZS4 312 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 CTNSO60931 367 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 CYC1P08574 325 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 TACR1P25103 407 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 TLX1P31314 330 aaPredicted RBP24.37■■□□□ 1.49
SMDT1-201ENST00000331479 TRA2BP62995 288 aaKnown RBP24.37■■□□□ 1.49
SMDT1-201ENST00000331479 ATP6AP1LQ52LC2 224 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 ANKRD37Q7Z713 158 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 OR4N5Q8IXE1 308 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 OR11G2Q8NGC1 345 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 THAP4Q8WY91 577 aa24.37■■□□□ 1.49
SMDT1-201ENST00000331479 PKD1L2Q7Z442 2459 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 IGHV3-20A0A0C4DH32 117 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 MYOCOSA0A1B0GUC4 107 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 MASP2O00187 686 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 ZNF195O14628 629 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 MYO1DO94832 1006 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 IL3P08700 152 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 ID2Q02363 134 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 EEF1A2Q05639 463 aaKnown RBP24.36■■□□□ 1.49
SMDT1-201ENST00000331479 DEFB109BQ30KR1 87 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 AMER2Q8N7J2 671 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 ANKRD9Q96BM1 317 aaPredicted RBP24.36■■□□□ 1.49
SMDT1-201ENST00000331479 VTI1BQ9UEU0 232 aa24.36■■□□□ 1.49
SMDT1-201ENST00000331479 LOC102723996A0A087X1L8 192 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 SLCO1B7G3V0H7 640 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 SDHDO14521 159 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 FGF17O60258 216 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 PRR35P0CG20 571 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 ACPPP15309 386 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 ZNF763Q0D2J5 394 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 COL28A1Q2UY09 1125 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.35■■□□□ 1.49
SMDT1-201ENST00000331479 DNAJB14Q8TBM8 379 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 TANKQ92844 425 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 EGLN2Q96KS0 407 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 PRORYQ9H606 182 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 HEY2Q9UBP5 337 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 POLHQ9Y253 713 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 TMED5Q9Y3A6 229 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 PCDHA9Q9Y5H5 950 aa24.35■■□□□ 1.49
SMDT1-201ENST00000331479 TCRBV16S1A1N1A0A5B0 115 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 BLACEA4D250 179 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 GUCY1B2O75343 617 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 COX6A1P12074 109 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 SDC1P18827 310 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 PPP2R1BP30154 601 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 MDH1P40925 334 aaKnown RBP24.34■■□□□ 1.49
SMDT1-201ENST00000331479 FOLH1Q04609 750 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 CPEB2Q7Z5Q1 589 aaKnown RBP24.34■■□□□ 1.49
SMDT1-201ENST00000331479 FNDC5Q8NAU1 212 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 CDC26Q8NHZ8 85 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 IP6K3Q96PC2 410 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 C1orf50Q9BV19 199 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 WDR55Q9H6Y2 383 aaPredicted RBP24.34■■□□□ 1.49
SMDT1-201ENST00000331479 WDR41Q9HAD4 459 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 C5AR2Q9P296 337 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 BAIAP2L1Q9UHR4 511 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 FBXL4Q9UKA2 621 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 MAN2B2Q9Y2E5 1009 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 USH1CQ9Y6N9 552 aa24.34■■□□□ 1.49
SMDT1-201ENST00000331479 PEX12O00623 359 aa24.33■■□□□ 1.49
SMDT1-201ENST00000331479 BCKDHAP12694 445 aa24.33■■□□□ 1.49
SMDT1-201ENST00000331479 EPHA3P29320 983 aa24.33■■□□□ 1.49
SMDT1-201ENST00000331479 LARP4Q71RC2 724 aaKnown RBP eCLIP24.33■■□□□ 1.498e-7■■■■□ 21.1
SMDT1-201ENST00000331479 WDR77Q9BQA1 342 aaPredicted RBP24.33■■□□□ 1.49
SMDT1-201ENST00000331479 CES1P1Q9UKY3 287 aa24.33■■□□□ 1.49
SMDT1-201ENST00000331479 IGHV1-45A0A0A0MS14 117 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 GOLGA8QA0A0J9YX86 632 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 C1orf226A1L170 272 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 GOLGA8OA6NCC3 632 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 TRPC5OSA6NMA1 111 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 GOLGA8NF8WBI6 632 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 PCDH17O14917 1159 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 EDF1O60869 148 aaKnown RBP24.33■■□□□ 1.48
SMDT1-201ENST00000331479 ALDH9A1P49189 494 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 STX4Q12846 297 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 PCOLCEQ15113 449 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 SLC9B1Q4ZJI4 515 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 SFT2D3Q587I9 215 aa24.33■■□□□ 1.48
SMDT1-201ENST00000331479 CPZQ66K79 652 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms