RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 OR4M1Q8NGD0 313 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 C1GALT1Q9NS00 363 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 RPL36Q9Y3U8 105 aaKnown RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 DSPPQ9NZW4 1301 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 LOC105371267A0A1B0GV96 52 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 GFYI3L273 518 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 LRRTM2O43300 516 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 SEC14L5O43304 696 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 BNIP3LO60238 219 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 IFNA14P01570 189 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 OSMP13725 252 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 MC1RQ01726 317 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 SLC5A12Q1EHB4 618 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 CRTC1Q6UUV9 634 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 APCDD1Q8J025 514 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 C19orf18Q8NEA5 215 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 MCOLN1Q9GZU1 580 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 RACGAP1Q9H0H5 632 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 KLHL42Q9P2K6 505 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 TMPRSS11EQ9UL52 423 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 HSPB11Q9Y547 144 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 UGDHO60701 494 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 LGI1O95970 557 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 C1QBP02746 253 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 SLC2A2P11168 524 aaPredicted RBP13.77□□□□□ -0.2
SNX20-202ENST00000330943 TIA1P31483 386 aaKnown RBP eCLIP13.77□□□□□ -0.2
SNX20-202ENST00000330943 SLC9A3P48764 834 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 LIM2P55344 173 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 CCL23P55773 120 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 CAV3P56539 151 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 NAE1Q13564 534 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 ELOAQ14241 798 aaKnown RBP13.77□□□□□ -0.2
SNX20-202ENST00000330943 CRB2Q5IJ48 1285 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 TRIM40Q6P9F5 258 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 LIX1LQ8IVB5 337 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 OXR1Q8N573 874 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 HUS1BQ8NHY5 278 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 GFM1Q96RP9 751 aaKnown RBP13.77□□□□□ -0.2
SNX20-202ENST00000330943 COQ7Q99807 217 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 TMEM38AQ9H6F2 299 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 ANKRA2Q9H9E1 313 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 NLKQ9UBE8 527 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 COMMD3Q9UBI1 195 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 REV1Q9UBZ9 1251 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 MOSPD1Q9UJG1 213 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 OR51B4Q9Y5P0 310 aa13.77□□□□□ -0.2
SNX20-202ENST00000330943 SPIN1Q9Y657 262 aaPredicted RBP13.77□□□□□ -0.2
SNX20-202ENST00000330943 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 FFAR1O14842 300 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 OR10H3O60404 316 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 RECKO95980 971 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 ADAP00813 363 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 MPC1LP0DKB6 136 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 CYP2A6P11509 494 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 RPS13P62277 151 aaKnown RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 EEF1A2Q05639 463 aaKnown RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 SP140Q13342 867 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 TNK1Q13470 666 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 NFE2L1Q14494 772 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 ATAT1Q5SQI0 421 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 TIGD3Q6B0B8 471 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 MAP6Q96JE9 813 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 BHLHE41Q9C0J9 482 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 NIPAL2Q9H841 368 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 BRD9Q9H8M2 597 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 TRIM45Q9H8W5 580 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 RNF186Q9NXI6 227 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 ING3Q9NXR8 418 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 ANGPT4Q9Y264 503 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 NOS1APO75052 506 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 ZNF8P17098 575 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 PKLRP30613 574 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 UQCRC1P31930 480 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 GSTM5P46439 218 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 XKP51811 444 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 LRRC74AQ0VAA2 488 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 SEC23BQ15437 767 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 ZNF630Q2M218 657 aaPredicted RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 TMEM201Q5SNT2 666 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 GRHL2Q6ISB3 625 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 HSDL2Q6YN16 418 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 ZNF783Q6ZMS7 281 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 Q8N402 240 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 IQCF1Q8N6M8 205 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 OR7G3Q8NG95 312 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 FOXJ1Q92949 421 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 CLP1Q92989 425 aaKnown RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 C1GALT1C1Q96EU7 318 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 KCTD7Q96MP8 289 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 WRAP53Q9BUR4 548 aaKnown RBP13.77□□□□□ -0.21
SNX20-202ENST00000330943 REEP4Q9H6H4 257 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 MCUBQ9NWR8 336 aa13.77□□□□□ -0.21
SNX20-202ENST00000330943 FAM240BA0A1B0GVZ2 78 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms