RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ZDHHC20Q5W0Z9 365 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 XKRXQ6PP77 449 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.25
EPHB3-201ENST00000330394 AUTS2Q8WXX7 1259 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 SLC35B4Q969S0 331 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 TRIM43Q96BQ3 446 aaPredicted RBP13.46□□□□□ -0.25
EPHB3-201ENST00000330394 PLD4Q96BZ4 506 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 RHBDF1Q96CC6 855 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 SPATA9Q9BWV2 254 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 SYNDIG1Q9H7V2 258 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 ELL3Q9HB65 397 aaPredicted RBP13.46□□□□□ -0.25
EPHB3-201ENST00000330394 TRIM36Q9NQ86 728 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 ITGB4P16144 1822 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 ANXA2P2A6NMY6 339 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
EPHB3-201ENST00000330394 ANXA2P07355 339 aaKnown RBP13.46□□□□□ -0.25
EPHB3-201ENST00000330394 ADORA3P0DMS8 318 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 HMGCLP35914 325 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 PITPNAQ00169 270 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 RPS26P11Q5JNZ5 115 aaPredicted RBP13.46□□□□□ -0.25
EPHB3-201ENST00000330394 PJA1Q8NG27 643 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 RPLP0P6Q8NHW5 317 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 GRHL3Q8TE85 626 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 TSEN15Q8WW01 171 aaKnown RBP13.46□□□□□ -0.25
EPHB3-201ENST00000330394 COL18A1P39060 1754 aa13.46□□□□□ -0.25
EPHB3-201ENST00000330394 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 A0A1B0GTL3 188 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 CLDN24A6NM45 220 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 SMLR1H3BR10 107 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 J3KTA2 159 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 CYP17A1P05093 508 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 MTHFD2P13995 350 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 CDKN2CP42773 168 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 RGNQ15493 299 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 TBCEQ15813 527 aaPredicted RBP13.46□□□□□ -0.26
EPHB3-201ENST00000330394 PRAMEF14Q5SWL7 426 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 PRAMEF13Q5VWM6 474 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 FAM171BQ6P995 826 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 PTRH1Q86Y79 214 aaKnown RBP13.46□□□□□ -0.26
EPHB3-201ENST00000330394 HUS1BQ8NHY5 278 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 ARRDC2Q8TBH0 407 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF300Q96RE9 604 aaPredicted RBP13.46□□□□□ -0.26
EPHB3-201ENST00000330394 NDC1Q9BTX1 674 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 ARNT2Q9HBZ2 717 aa13.46□□□□□ -0.26
EPHB3-201ENST00000330394 MTMR11A4FU01 709 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ICMTO60725 284 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 IFNA6P05013 189 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 GSTM3P21266 225 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 TIA1P31483 386 aaKnown RBP eCLIP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 PYCR1P32322 319 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ADRA1AP35348 466 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 SELENBP1Q13228 472 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 DSG2Q14126 1118 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 SLC36A4Q6YBV0 504 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF767PQ75MW2 155 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF438Q7Z4V0 828 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 DNAJB7Q7Z6W7 309 aaPredicted RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 GDPD1Q8N9F7 314 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 CNDP2Q96KP4 475 aaKnown RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 MCCC1Q96RQ3 725 aaPredicted RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 TAS2R10Q9NYW0 307 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 CXXC1Q9P0U4 656 aaPredicted RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 NDOR1Q9UHB4 597 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 FAM155AB1AL88 458 aaPredicted RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 OR12D2P58182 307 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ARSIQ5FYB1 569 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 KIAA0319Q5VV43 1072 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 FAAH2Q6GMR7 532 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 DNAJC5GQ8N7S2 189 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 OR4K5Q8NGD3 323 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ARL6Q9H0F7 186 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ENPP4Q9Y6X5 453 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ARHGAP33O14559 1287 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 INPPL1O15357 1258 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 TEX28O15482 410 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 ERI3O43414 337 aaKnown RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 JRKO75564 520 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 RHCEP18577 417 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 IGFBP6P24592 240 aaPredicted RBP13.45□□□□□ -0.26
EPHB3-201ENST00000330394 SELENOWP63302 87 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 MC1RQ01726 317 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 MICAQ29983 383 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 CEACAM19Q7Z692 300 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 COMMD7Q86VX2 200 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 DOK4Q8TEW6 326 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 INIPQ9NRY2 104 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 SARDHQ9UL12 918 aa13.45□□□□□ -0.26
EPHB3-201ENST00000330394 C2orf78A6NCI8 922 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 TSPAN6O43657 245 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 TRIM3O75382 744 aaPredicted RBP13.44□□□□□ -0.26
EPHB3-201ENST00000330394 B3GALT4O96024 378 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 ITGAMP11215 1152 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 KELP23276 732 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 EPHA2P29317 976 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 FLYWCH1Q4VC44 716 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 FAM46CQ5VWP2 391 aa13.44□□□□□ -0.26
EPHB3-201ENST00000330394 FRMPD2BQ6IN97 320 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms