RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 OR14A16Q8NHC5 309 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 SIGLEC12Q96PQ1 595 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 SLX1AQ9BQ83 275 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 ZNF717Q9BY31 904 aaPredicted RBP25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 ELOVL6Q9H5J4 265 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 RPF2Q9H7B2 306 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 FLNCQ14315 2725 aa25.77■■□□□ 1.72
ATPAF1-201ENST00000329231 FLNBO75369 2602 aaKnown RBP25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 DLX3O60479 287 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 CRYABP02511 175 aaKnown RBP25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 TNNI3P19429 210 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 BUD31P41223 144 aaPredicted RBP25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 TNFRSF17Q02223 184 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 NUDT13Q86X67 352 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 TDRPQ86YL5 185 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 SLC22A9Q8IVM8 553 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 MORN4Q8NDC4 146 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 MYRIPQ8NFW9 859 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 DNAJB8Q8NHS0 232 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 TANKQ92844 425 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 ANKRD9Q96BM1 317 aaPredicted RBP25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 C5orf34Q96MH7 638 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 PARD6BQ9BYG5 372 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 LRFN1Q9P244 771 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 ATG4BQ9Y4P1 393 aa25.76■■□□□ 1.71
ATPAF1-201ENST00000329231 ASH1LQ9NR48 2969 aaKnown RBP25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 A0A0A6YYD5 115 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 MYOCOSA0A1B0GUC4 107 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 EEDO75530 441 aaKnown RBP25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 SUPT7LO94864 414 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 CYB561P49447 251 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 ST13P50502 369 aaKnown RBP25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 HNRNPH2P55795 449 aaKnown RBP25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 CLCQ05315 142 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 BIKQ13323 160 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 ZNF678Q5SXM1 525 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 ZNF324BQ6AW86 544 aaPredicted RBP25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 SPINK14Q6IE38 97 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 MRM1Q6IN84 353 aaKnown RBP25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 TMEM178AQ8NBL3 297 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 TRPC4APQ8TEL6 797 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 PTPMT1Q8WUK0 201 aaPredicted RBP25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 NR4A3Q92570 626 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 CAVIN3Q969G5 261 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 AHSPQ9NZD4 102 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 SNX6Q9UNH7 406 aa25.75■■□□□ 1.71
ATPAF1-201ENST00000329231 A0A1W2PPM1 405 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 PPP6CO00743 305 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 PROM1O43490 865 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 ZFAND5O76080 213 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 FAM58BPP0C7Q3 252 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 KRT15P19012 456 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 TSPAN8P19075 237 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 IMPDH1P20839 514 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 SLCO1A2P46721 670 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 ID2Q02363 134 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 UNC50Q53HI1 259 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 SGO1Q5FBB7 561 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 C18orf63Q68DL7 685 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 LETMD1Q6P1Q0 360 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 THAP3Q8WTV1 239 aaPredicted RBP25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 SCMH1Q96GD3 660 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 KLHL1Q9NR64 748 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 TRPS1Q9UHF7 1281 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 ZNF223Q9UK11 482 aaPredicted RBP25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 ASB4Q9Y574 426 aa25.74■■□□□ 1.71
ATPAF1-201ENST00000329231 A0A1B0GTL3 188 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 C17orf105B2RV13 164 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 TMPRSS11DO60235 418 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 FGF17O60258 216 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 GLRA3O75311 464 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 COX7A2P14406 83 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 TRHRP34981 398 aaPredicted RBP25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 HLCSP50747 726 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 PRKAA2P54646 552 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 IGLV3-21P80748 117 aaPredicted RBP25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 RASA2Q15283 850 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 ZNF468Q5VIY5 522 aaPredicted RBP25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 OR4N5Q8IXE1 308 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 TMEM237Q96Q45 408 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 TRIM45Q9H8W5 580 aaPredicted RBP25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 WDR41Q9HAD4 459 aa25.73■■□□□ 1.71
ATPAF1-201ENST00000329231 SMIM23A6NLE4 172 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 SEMA7AO75326 666 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 NEURL1O76050 574 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 TUBBP07437 444 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 SP1P08047 785 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 NUDT17P0C025 328 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 FOLH1Q04609 750 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 SLC25A25Q6KCM7 469 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 HSDL2Q6YN16 418 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 PAGE2Q7Z2X7 111 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 SELENOMQ8WWX9 145 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 RBM18Q96H35 190 aaKnown RBP25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 DGAT2Q96PD7 388 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 ZNF382Q96SR6 550 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 OR8D2Q9GZM6 311 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 ADAM29Q9UKF5 820 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 RAB21Q9UL25 225 aa25.72■■□□□ 1.71
ATPAF1-201ENST00000329231 STK38LQ9Y2H1 464 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms