RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 ZDHHC21Q8IVQ6 265 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 BPIFB6Q8NFQ5 453 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 NLGN4YQ8NFZ3 816 aaPredicted RBP13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 TMEM234Q8WY98 164 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 OR1F2PQ96R84 312 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 RP1P56715 2156 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 TRBC2A0A5B9 178 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 CDC14CA4D256 554 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 FAM149AA5PLN7 773 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 CISD3P0C7P0 127 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 ZNF33BQ06732 778 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 GRB7Q14451 532 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 GPAT4Q86UL3 456 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 SFTPA1Q8IWL2 248 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 FITM2Q8N6M3 262 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 OR52E4Q8NGH9 312 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 LRRC58Q96CX6 371 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 CCNL2Q96S94 520 aaPredicted RBP13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 CD180Q99467 661 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 G6PC3Q9BUM1 346 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 TRPM7Q96QT4 1865 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 ACPPP15309 386 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 SH3BP2P78314 561 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 DLG1Q12959 904 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 GALNT5Q7Z7M9 940 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 ETFBKMTQ8IXQ9 262 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 C8orf59Q8N0T1 100 aaPredicted RBP13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 CADM4Q8NFZ8 388 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 OR4C6Q8NH72 309 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 SEC14L1Q92503 715 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 RNFT2Q96EX2 444 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 Q96MT0 163 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 IFT27Q9BW83 186 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 SORBS1Q9BX66 1292 aaKnown RBP13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 SLITRK2Q9H156 845 aa13.73□□□□□ -0.21
SYNGR1-203ENST00000328933 SPTY2D1-AS1A0A0U1RR47 76 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 CHST10O43529 356 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 VNN2O95498 520 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 ZCCHC18P0CG32 403 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 MAT1AQ00266 395 aaKnown RBP13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 CDKL4Q5MAI5 379 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 TMEM215Q68D42 235 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 PTCHD4Q6ZW05 846 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 TRPV4Q9HBA0 871 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 TBC1D23Q9NUY8 699 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 COL11A1P12107 1806 aaPredicted RBP13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 A0A1W2PP18 115 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 CPSF4LA6NMK7 179 aaKnown RBP13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 I6L893 689 aaPredicted RBP13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 ZNF823P16415 610 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 PTNP21246 168 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 CTBP2P56545 445 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 RPS26P62854 115 aaKnown RBP13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 GRIK2Q13002 908 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 GPR19Q15760 415 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 IER2Q9BTL4 223 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 SEC61A2Q9H9S3 476 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 IGSF5Q9NSI5 407 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 KCMF1Q9P0J7 381 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 VSTM5A8MXK1 200 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 TP73O15350 636 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 PSMG1O95456 288 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 POU2F2P09086 479 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 ACADSP16219 412 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 DPTQ07507 201 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 TMEM225Q6GV28 225 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 LETMD1Q6P1Q0 360 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 TEX19Q8NA77 164 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 DOHHQ9BU89 302 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 OR51V1Q9H2C8 321 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 EURLQ9NYK6 297 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 ERVK-19Q9WJR5 959 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 SCN10AQ9Y5Y9 1956 aa13.72□□□□□ -0.21
SYNGR1-203ENST00000328933 LMO7DNF2Z398 122 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 DLL1O00548 723 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 CPNE3O75131 537 aaKnown RBP13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 RRADP55042 308 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 CORO7P57737 925 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 SRYQ05066 204 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 METRNLQ641Q3 311 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 NANOGNBQ7Z5D8 188 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 NET1Q7Z628 596 aaPredicted RBP13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 VRK3Q8IV63 474 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 KIR3DX1Q9H7L2 352 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 RNF121Q9H920 327 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 ICE1Q9Y2F5 2266 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 G3V2T6 193 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 SOX1O00570 391 aaPredicted RBP13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 SLC18A1P54219 525 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 ACTR3P61158 418 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 TARDBPQ13148 414 aaKnown RBP eCLIP13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 C6orf120Q7Z4R8 191 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 PRR22Q8IZ63 422 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 LNX2Q8N448 690 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 OR2L3Q8NG85 312 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 APIPQ96GX9 242 aa13.71□□□□□ -0.21
SYNGR1-203ENST00000328933 TWSG1Q9GZX9 223 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms