RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MAPK9P45984 424 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 LIM2P55344 173 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 MADCAM1Q13477 382 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PUM1Q14671 1186 aaKnown RBP eCLIP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 ZNF77Q15935 545 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 C17orf64Q86WR6 236 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 KRT78Q8N1N4 520 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 PARP16Q8N5Y8 322 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 GOT1L1Q8NHS2 421 aaPredicted RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 TFGQ92734 400 aaPredicted RBP13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 C14orf119Q9NWQ9 140 aa13.38□□□□□ -0.27
ATP2C1-201ENST00000328560 DPM1O60762 260 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 ENTPD6O75354 484 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 MED26O95402 600 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 ALPPL2P10696 532 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 RHCEP18577 417 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SOX3P41225 446 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SLC6A11P48066 632 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 AGAP7PQ5VUJ5 663 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 VN1R5Q7Z5H4 357 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SLC9B2Q86UD5 537 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 MEX3DQ86XN8 651 aaKnown RBP13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 UCN3Q969E3 161 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 YIPF4Q9BSR8 244 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 NUMA1Q14980 2115 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 GLOD5A6NK44 160 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 PRRT4C9JH25 899 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 PLPP1O14494 284 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SNPHO15079 494 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SLC28A2O43868 658 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SPNP16150 400 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 UQCRC2P22695 453 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 GPC1P35052 558 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 BMPR1AP36894 532 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 EEF1A2Q05639 463 aaKnown RBP13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 PDE7AQ13946 482 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 PLA2G15Q8NCC3 412 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 OR8D1Q8WZ84 308 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 RAD51AP1Q96B01 352 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 ZDHHC5Q9C0B5 715 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SEMA3GQ9NS98 782 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 AHSPQ9NZD4 102 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 DEC1Q9P2X7 70 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 CLEC2DQ9UHP7 191 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 FFAR1O14842 300 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 CEBPBP17676 345 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 NKX2-5P52952 324 aaPredicted RBP13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 LINC00299Q6ZSB3 139 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 FAM20CQ8IXL6 584 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 OR8H2Q8N162 312 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 IQCF1Q8N6M8 205 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 MINDY2Q8NBR6 621 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 UBE2E3Q969T4 207 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 COQ10AQ96MF6 247 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 RAD9AQ99638 391 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 SPATA7Q9P0W8 599 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 DPP7Q9UHL4 492 aa13.37□□□□□ -0.27
ATP2C1-201ENST00000328560 CKAP5Q14008 2032 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TLR4O00206 839 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SCAMP1O15126 338 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 PPM1DO15297 605 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 PDPK1O15530 556 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 CYP17A1P05093 508 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 GABRB1P18505 474 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 CBLP22681 906 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SOX6P35712 828 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TARDBPQ13148 414 aaKnown RBP eCLIP13.36□□□□□ -0.275e-6■■■■□ 20.6
ATP2C1-201ENST00000328560 SEC23BQ15437 767 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 DCST1Q5T197 706 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 C6orf120Q7Z4R8 191 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 NLRP8Q86W28 1048 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 MAPKAP1Q9BPZ7 522 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 MACROD1Q9BQ69 325 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 OSGEPL1Q9H4B0 414 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 ERVK13-1Q9NX77 482 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 DKK3Q9UBP4 350 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SEC14L3Q9UDX4 400 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SLC23A2Q9UGH3 650 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 PRR23AA6NEV1 266 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 EFCAB10A6NFE3 127 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 ANHXE9PGG2 379 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 WWP2O00308 870 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 ARHGAP33O14559 1287 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 LATO43561 262 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 APOL3O95236 402 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 PCCBP05166 539 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 UGT2B10P36537 528 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 OLR1P78380 273 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 PIN1Q13526 163 aaPredicted RBP13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 SPATC1Q76KD6 591 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 ADGRF3Q8IZF5 1079 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 TCEANCQ8N8B7 351 aa13.36□□□□□ -0.27
ATP2C1-201ENST00000328560 OR5D16Q8NGK9 328 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms