RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR7G3Q8NG95 312 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 MFSD8Q8NHS3 518 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CFAP97Q9P2B7 532 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SNX10Q9Y5X0 201 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 A6NL46 340 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CPSF4LA6NMK7 179 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 IL1AP01583 271 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SLC44A3Q8N4M1 653 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 DTWD1Q8N5C7 304 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 OR14K1Q8NGZ2 314 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 LRRC46Q96FV0 321 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 FBXL18Q96ME1 805 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 BCO2Q9BYV7 579 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 OSGEPL1Q9H4B0 414 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 FARSAQ9Y285 508 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SDK2Q58EX2 2172 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 IGLV3-22A0A075B6J6 115 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 LOC285095A0A1B0GVY8 99 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CLDN5O00501 218 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 E2F3O00716 465 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ADAM12O43184 909 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SIX3O95343 332 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SOX14O95416 240 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SPAM1P38567 509 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NUMBP49757 651 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CRISP3P54108 245 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 TDGQ13569 410 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF283Q8N7M2 679 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 AGBL3Q8NEM8 1001 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GPRC5AQ8NFJ5 357 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NFKBIDQ8NI38 313 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 KXD1Q9BQD3 176 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 PLEKHA1Q9HB21 404 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 DDTLA6NHG4 134 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF254O75437 659 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 DIRAS1O95057 198 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 FABP1P07148 127 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CKBP12277 381 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ARF4P18085 180 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 MAOAP21397 527 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CYCSP99999 105 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 C2orf80Q0P641 193 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ILF3Q12906 894 aaKnown RBP eCLIP6.79□□□□□ -1.321e-6■■■■□ 23.3
SMC1A-201ENST00000322213 PPP1R8Q12972 351 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 MFSD14CQ5VZR4 134 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NKD1Q969G9 470 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 KCNH6Q9H252 994 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 EQTNQ9NQ60 294 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 FAM86C1Q9NVL1 165 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SMIM30A4D0T7 59 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 C7orf72A4D263 438 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 MOXD2PA6NHM9 499 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 HPGDSO60760 199 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SLC22A5O76082 557 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ACADMP11310 421 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 TPT1P13693 172 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 RPL10P27635 214 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 DNASE1L1P49184 302 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NRLP54845 237 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 PAFAH1B3Q15102 231 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 LRIT3Q3SXY7 679 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 AKR1C8PQ5T2L2 129 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 AVPI1Q5T686 147 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF529Q6P280 563 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CEACAM20Q6UY09 585 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NETO2Q8NC67 525 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 KIAA1143Q96AT1 154 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF599Q96NL3 588 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 CD180Q99467 661 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ELL3Q9HB65 397 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NANSQ9NR45 359 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 F5H5P2 479 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 WNT9AO14904 365 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NUPL2O15504 423 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 BCKDHAP12694 445 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 PPP3CBP16298 524 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 VEGFCP49767 419 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 WNT4P56705 351 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 DUSP6Q16828 381 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 FRG2Q64ET8 278 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 APOBEC3HQ6NTF7 200 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 HERVK_113Q902F9 699 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 FRG2BQ96QU4 278 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 AIF1LQ9BQI0 150 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 THAP7Q9BT49 309 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 PCBD2Q9H0N5 130 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ACOT13Q9NPJ3 140 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 NUP210Q8TEM1 1887 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 APBA3O96018 575 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ARL2P36404 184 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 SNTB2Q13425 540 aaKnown RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF169Q14929 603 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZCCHC12Q6PEW1 402 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GSG1LQ6UXU4 331 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 GOLGA7Q7Z5G4 137 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 DCUN1D3Q8IWE4 304 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZFPM2Q8WW38 1151 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF516Q92618 1163 aa6.79□□□□□ -1.32
SMC1A-201ENST00000322213 MCMBPQ9BTE3 642 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms