RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DPM1O60762 260 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 PROS1P07225 676 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 ETFAP13804 333 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 ALOX12P18054 663 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 SOAT1P35610 550 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 BUD31P41223 144 aaPredicted RBP16.88■□□□□ 0.29
RAB39A-201ENST00000320578 PRIM2P49643 509 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 CSNK1EP49674 416 aaKnown RBP16.88■□□□□ 0.29
RAB39A-201ENST00000320578 DMWDQ09019 674 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 C14orf28Q4W4Y0 310 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 ZC3H12BQ5HYM0 836 aaKnown RBP16.88■□□□□ 0.29
RAB39A-201ENST00000320578 CWF19L1Q69YN2 538 aaKnown RBP16.88■□□□□ 0.29
RAB39A-201ENST00000320578 FRMPD2BQ6IN97 320 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 PIWIL3Q7Z3Z3 882 aaKnown RBP16.88■□□□□ 0.29
RAB39A-201ENST00000320578 OR4N4Q8N0Y3 316 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 CBR4Q8N4T8 237 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 METTL25Q8N6Q8 603 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 TRAPPC9Q96Q05 1148 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 BBS4Q96RK4 519 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 MAPKAP1Q9BPZ7 522 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 IL1RAPQ9NPH3 570 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 SEMA3GQ9NS98 782 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 GIMAP4Q9NUV9 329 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 KCMF1Q9P0J7 381 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 RAPGEFL1Q9UHV5 662 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 FBXW2Q9UKT8 454 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 AP4B1Q9Y6B7 739 aa16.88■□□□□ 0.29
RAB39A-201ENST00000320578 MAGEA13PA6NCF6 341 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 SAC3D1A6NKF1 404 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 SOCS2O14508 198 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 PGRMC2O15173 223 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 B3GALT2O43825 422 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 SRPX2O60687 465 aaPredicted RBP16.87■□□□□ 0.29
RAB39A-201ENST00000320578 NR2F6P10588 404 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 TDGF1P13385 188 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 PVRP15151 417 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 TYRP1P17643 537 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 CSNK2A2P19784 350 aaPredicted RBP16.87■□□□□ 0.29
RAB39A-201ENST00000320578 RXRGP48443 463 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 MRPS35P82673 323 aaKnown RBP16.87■□□□□ 0.29
RAB39A-201ENST00000320578 SIGLEC14Q08ET2 396 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 C16orf72Q14CZ0 275 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 LRRC23Q53EV4 343 aaPredicted RBP16.87■□□□□ 0.29
RAB39A-201ENST00000320578 CRB2Q5IJ48 1285 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 BHLHB9Q6PI77 547 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 SVOPLQ8N434 492 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 C19orf47Q8N9M1 422 aaKnown RBP16.87■□□□□ 0.29
RAB39A-201ENST00000320578 SLC38A3Q99624 504 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 NPLQ9BXD5 320 aaPredicted RBP16.87■□□□□ 0.29
RAB39A-201ENST00000320578 EPB41L1Q9H4G0 881 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 A4GALTQ9NPC4 353 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 ADPRHL2Q9NX46 363 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 C5AR2Q9P296 337 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 ENTPD4Q9Y227 616 aa16.87■□□□□ 0.29
RAB39A-201ENST00000320578 MDC1Q14676 2089 aaKnown RBP16.87■□□□□ 0.29
RAB39A-201ENST00000320578 CST1P01037 141 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 IFNA14P01570 189 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 MPIP34949 423 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CCT3P49368 545 aaKnown RBP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 DSTNP60981 165 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CDK6Q00534 326 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 TNFRSF17Q02223 184 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 SCARB2Q14108 478 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 ANGPTL8Q6UXH0 198 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 C6orf120Q7Z4R8 191 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 ZNF761Q86XN6 746 aaPredicted RBP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CARFQ8N187 725 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 TCTN2Q96GX1 697 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 ZNF681Q96N22 645 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CD180Q99467 661 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 ACSL6Q9UKU0 697 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 DAPP1Q9UN19 280 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 MAP4K5Q9Y4K4 846 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 SNX8Q9Y5X2 465 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 A0A1B0GTW7 788 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 GCM2O75603 506 aaPredicted RBP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 ST6GAL1P15907 406 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CDH3P22223 829 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 TLX1P31314 330 aaPredicted RBP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CTSKP43235 329 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CDK9P50750 372 aaKnown RBP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 NCBP2P52298 156 aaKnown RBP eCLIP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 PCBP3P57721 371 aaKnown RBP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 HSPB3Q12988 150 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 BLMHQ13867 455 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 NRF1Q16656 503 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 NHSL2Q5HYW2 709 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 C18orf63Q68DL7 685 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 NIPAL1Q6NVV3 410 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 DNAJC22Q8N4W6 341 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CSNK1A1LQ8N752 337 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 OR5AK3PQ8NH89 298 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 SUN3Q8TAQ9 357 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 KLHL6Q8WZ60 621 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 UCN3Q969E3 161 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 CNRIP1Q96F85 164 aaPredicted RBP16.86■□□□□ 0.29
RAB39A-201ENST00000320578 C10orf90Q96M02 699 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 OSBPL10Q9BXB5 764 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 PADI4Q9UM07 663 aa16.86■□□□□ 0.29
RAB39A-201ENST00000320578 ANGPT4Q9Y264 503 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms